Factsheet for TraesCS4D01G053700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G053700.2	Wheat	vacuole	95.74	96.89
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	95.27	96.41
HORVU4Hr1G008950.1	Barley	vacuole	92.67	94.0
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	79.2	74.78
Zm00001d013390_P001	Maize	extracellular	72.34	69.23
EER93548	Sorghum	vacuole	72.81	69.21
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	54.37	52.51
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	53.43	49.24
Solyc04g080260.2.1	Tomato	extracellular	50.35	48.3
PGSC0003DMT400013154	Potato	extracellular, vacuole	50.12	48.07
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	52.72	47.35
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	50.59	46.62
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	50.59	46.62
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	48.23	46.58
Bra033641.1-P	Field mustard	extracellular, vacuole	46.81	45.83
CDY22386	Canola	extracellular, vacuole	46.57	45.6
KRH24481	Soybean	cytosol	38.3	45.0
CDX71547	Canola	extracellular, vacuole	46.34	44.95
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	49.41	44.95
PGSC0003DMT400001908	Potato	extracellular	48.94	44.04
KRH15221	Soybean	extracellular	50.35	44.01
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	50.59	43.67
Solyc01g109570.2.1	Tomato	extracellular	48.7	43.55
Bra039852.1-P	Field mustard	vacuole	44.92	40.77
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	48.46	40.67
CDX69064	Canola	extracellular, plasma membrane, vacuole	48.46	40.59
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.75	39.92
CDX75437	Canola	extracellular, plasma membrane, vacuole	47.75	39.92
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	37.83	39.51
AT2G16230.1	Thale cress	vacuole	46.57	39.16
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	36.88	38.52
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	35.46	38.46
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	36.41	37.84
CDY37244	Canola	vacuole	45.15	37.3
CDY26761	Canola	vacuole	44.68	36.91
TraesCS5D01G335600.1	Wheat	vacuole	34.28	36.9
Bra017659.1-P	Field mustard	vacuole	48.23	36.82
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	36.64	36.13
TraesCS3D01G249500.1	Wheat	vacuole	35.22	34.65
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	33.1	34.57
TraesCS4D01G225700.1	Wheat	vacuole	33.1	33.49
TraesCS7D01G374900.1	Wheat	plastid, vacuole	34.28	32.81
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	34.75	32.74
TraesCS6D01G305000.1	Wheat	extracellular	36.88	32.57
TraesCS6D01G148900.1	Wheat	plastid	33.81	32.28
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	34.75	31.14
TraesCS2D01G436800.1	Wheat	vacuole	28.37	30.46
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	32.62	29.36
TraesCS5D01G400400.1	Wheat	extracellular	31.91	27.33
TraesCS4D01G241900.1	Wheat	extracellular	30.97	26.2
TraesCS3D01G277300.4	Wheat	vacuole	31.68	25.28
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	29.31	25.15
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	32.15	24.16
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	31.21	23.66
TraesCS1D01G431300.1	Wheat	vacuole	31.91	23.52
TraesCS5D01G160700.1	Wheat	plasma membrane	28.84	23.33
TraesCS2D01G230900.1	Wheat	plasma membrane	29.31	23.31
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	28.37	21.82
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4D01G053700.1	EnsemblPlantsGene:TraesCS4D01G053700	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF107	PFAM:PF00332	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF51445	TMHMM:TMhelix	MapMan:50.3.2	:	:	:

Description

No Description!

Coordinates

chr4D:+:29827189..29829339

Molecular Weight (calculated)

43798.3 Da

IEP (calculated)

5.617

GRAVY (calculated)

0.195

Length

423 amino acids

Sequence
(BLAST)

001: MAGPSMPQPL LVALLLLGFL LLIHVPYAAP QSFIGINYGD IADNLPPPAS TARLLKSTTI GKVRLYRTDP AVVAAFAGTS ISLLLGAANA DIPSFASSPS
101: AAAAWVAAHL PSSSSPAVNG ISVGNEVLYS GDAALISQLV PALQNIYDAL PANSGIKVST VNAMDVLASS DPPSSGAFKP ELSAALDPLL AFLSKTGSPF
201: LVNPYPYFAY QDDPRPDTLA FCLFQPNAGR PDAGSGLTYT SMFDAQVDAV RAALDAKGYK DVEVVVAETG WPHSGGADEA GASVENARAF VSNLVSHLRS
301: MVGTPRMPGK SVDTYLFAVY DEDLKPGKAS EKSFGLFQTT LTETYPTGLM RNGTAGLAPA PAPTVRPASP PPAIPQVTPV QPQPSAASAA TAPPRHVRSA
401: AELPRTISAL HVSACFLFMS LLV

Best Arabidopsis Sequence Match ( AT5G42720.1 )
(BLAST)

001: MRASVYSLIL LFFSCLLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGS DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVET
101: NVVPYYPASK IVLIAVGNEI TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA DILKGLLEFN SETGSPFAVN
201: PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG
301: TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT
401: DVHNSTPRSA SLAHICRSLS ISASMFFVSV LYALIILL

Arabidopsis Description

Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q8VY12]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.