Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G077800.1 | Wheat | vacuole | 97.03 | 97.7 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 90.41 | 85.9 |
| HORVU4Hr1G065340.1 | Barley | extracellular, vacuole | 80.59 | 81.9 |
| Os03t0227400-01 | Rice | plasma membrane | 67.81 | 81.37 |
| EER95211 | Sorghum | extracellular, vacuole | 79.22 | 80.32 |
| Zm00001d028331_P001 | Maize | plastid | 76.26 | 64.23 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 52.51 | 54.37 |
| GSMUA_Achr6P31650_001 | Banana | extracellular, vacuole | 52.74 | 50.33 |
| KRH51533 | Soybean | endoplasmic reticulum, extracellular, vacuole | 49.54 | 47.28 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 50.0 | 46.5 |
| VIT_18s0001g12390.t01 | Wine grape | extracellular, vacuole | 49.32 | 46.45 |
| KRH60849 | Soybean | endoplasmic reticulum, extracellular, vacuole | 48.4 | 46.19 |
| Solyc04g080260.2.1 | Tomato | extracellular | 46.35 | 46.03 |
| Bra033641.1-P | Field mustard | extracellular, vacuole | 45.21 | 45.83 |
| KRH24481 | Soybean | cytosol | 37.67 | 45.83 |
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 46.12 | 45.8 |
| PGSC0003DMT400001908 | Potato | extracellular | 49.09 | 45.74 |
| CDY22386 | Canola | extracellular, vacuole | 44.98 | 45.6 |
| Solyc01g109570.2.1 | Tomato | extracellular | 48.4 | 44.82 |
| CDX71547 | Canola | extracellular, vacuole | 44.52 | 44.72 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 44.52 | 44.52 |
| KRH15221 | Soybean | extracellular | 47.95 | 43.39 |
| VIT_03s0063g02490.t01 | Wine grape | endoplasmic reticulum, extracellular | 48.4 | 43.27 |
| Bra039852.1-P | Field mustard | vacuole | 44.98 | 42.27 |
| CDX69064 | Canola | extracellular, plasma membrane, vacuole | 47.95 | 41.58 |
| CDX75437 | Canola | extracellular, plasma membrane, vacuole | 47.95 | 41.5 |
| Bra011537.1-P | Field mustard | extracellular, plasma membrane, vacuole | 47.72 | 41.3 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.03 | 40.87 |
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 36.53 | 39.51 |
| AT2G16230.1 | Thale cress | vacuole | 45.21 | 39.36 |
| CDY37244 | Canola | vacuole | 45.21 | 38.67 |
| CDY26761 | Canola | vacuole | 44.75 | 38.28 |
| TraesCS2D01G292500.1 | Wheat | extracellular, plasma membrane, vacuole | 33.33 | 37.44 |
| Bra017659.1-P | Field mustard | vacuole | 47.03 | 37.18 |
| TraesCS5D01G335600.1 | Wheat | vacuole | 33.33 | 37.15 |
| TraesCS7D01G065400.1 | Wheat | extracellular, vacuole | 36.3 | 37.06 |
| TraesCS3D01G366700.2 | Wheat | endoplasmic reticulum, vacuole | 33.33 | 36.05 |
| TraesCS1D01G275700.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 32.65 | 35.14 |
| TraesCS2D01G436800.1 | Wheat | vacuole | 30.59 | 34.01 |
| TraesCS4D01G136800.1 | Wheat | cytosol, extracellular, plastid, vacuole | 34.47 | 33.63 |
| TraesCS3D01G249500.1 | Wheat | vacuole | 32.42 | 33.02 |
| TraesCS4D01G225700.1 | Wheat | vacuole | 31.51 | 33.01 |
| TraesCS6D01G305000.1 | Wheat | extracellular | 35.84 | 32.78 |
| TraesCS1D01G056500.1 | Wheat | extracellular, vacuole | 30.14 | 32.59 |
| TraesCS6D01G148900.1 | Wheat | plastid | 32.19 | 31.83 |
| TraesCS7D01G257600.1 | Wheat | extracellular, vacuole | 33.33 | 31.06 |
| TraesCS5D01G335500.1 | Wheat | golgi, plasma membrane, vacuole | 33.33 | 30.93 |
| TraesCS7D01G374900.1 | Wheat | plastid, vacuole | 30.37 | 30.09 |
| TraesCS5D01G400400.1 | Wheat | extracellular | 31.96 | 28.34 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 30.82 | 27.0 |
| TraesCS3D01G277300.4 | Wheat | vacuole | 32.42 | 26.79 |
| TraesCS2D01G201000.1 | Wheat | extracellular, plasma membrane, vacuole | 29.45 | 26.17 |
| TraesCS2D01G230900.1 | Wheat | plasma membrane | 29.91 | 24.62 |
| TraesCS2D01G221800.1 | Wheat | extracellular, vacuole | 30.14 | 24.0 |
| TraesCS1D01G431200.1 | Wheat | extracellular, vacuole | 30.37 | 23.84 |
| TraesCS1D01G430700.1 | Wheat | extracellular, vacuole | 30.37 | 23.62 |
| TraesCS5D01G160700.1 | Wheat | plasma membrane | 28.08 | 23.52 |
| TraesCS1D01G431300.1 | Wheat | vacuole | 29.68 | 22.65 |
| TraesCS2D01G200900.1 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G235000.1 | EnsemblPlantsGene:TraesCS4D01G235000 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| KEGG:00500+3.2.1.39 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF109 | PFAM:PF00332 | SEG:seg | SUPFAM:SSF51445 |
| TMHMM:TMhelix | MapMan:50.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:395381614..395384008
Molecular Weight (calculated)
45049.2 Da
IEP (calculated)
4.528
GRAVY (calculated)
0.124
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRRWQLDA AAVIFRLLLL HGAFLFQLAT SQSFIGVNYG TIADNLPPAA STASLLTSTS IGKLRLYEPQ PDLVAALAGS NISILLGVPN SDVPSLAASP
101: AAAASWAAAN IPTTVSVSAI SVGNELLNSG DPTLAPQLLP AMQNLLAALP AGSTTKVSTV HSMAVLAASD PPSSGAFHPD LAGSLDPVLD FLRQNGSPFM
201: INPYPYFAYA SDTRDETLAF CLFQPNPGRV DAASGLTYMN MFDAQLDAVR AALDGKGYAG VDIVIAETGW PYRGDADEAG ATPDNARAYN GNLVAHLRSQ
301: VGTPRTPGRS VDTYLFALYD EDLKPGPVSE RSFGLYQADL TANYDIGLAK GSASPSTSGQ IGITAAPAQG APQATRGATP AGYCVTTGSV PGGTQQVQQQ
401: SSSCYVPGTA ASPRADAGVP LLVLFGVLLG LAMVAESR
101: AAAASWAAAN IPTTVSVSAI SVGNELLNSG DPTLAPQLLP AMQNLLAALP AGSTTKVSTV HSMAVLAASD PPSSGAFHPD LAGSLDPVLD FLRQNGSPFM
201: INPYPYFAYA SDTRDETLAF CLFQPNPGRV DAASGLTYMN MFDAQLDAVR AALDGKGYAG VDIVIAETGW PYRGDADEAG ATPDNARAYN GNLVAHLRSQ
301: VGTPRTPGRS VDTYLFALYD EDLKPGPVSE RSFGLYQADL TANYDIGLAK GSASPSTSGQ IGITAAPAQG APQATRGATP AGYCVTTGSV PGGTQQVQQQ
401: SSSCYVPGTA ASPRADAGVP LLVLFGVLLG LAMVAESR
001: MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IKB3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.