Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
26583031
|
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 98.64 | 98.64 |
| VIT_18s0001g12390.t01 | Wine grape | extracellular, vacuole | 68.71 | 65.16 |
| Solyc01g109570.2.1 | Tomato | extracellular | 63.72 | 59.41 |
| Bra033641.1-P | Field mustard | extracellular, vacuole | 57.82 | 59.03 |
| CDY22386 | Canola | extracellular, vacuole | 57.82 | 59.03 |
| CDX71547 | Canola | extracellular, vacuole | 57.14 | 57.8 |
| KRH15221 | Soybean | extracellular | 62.13 | 56.61 |
| Os03t0227400-01 | Rice | plasma membrane | 46.71 | 56.44 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 54.42 | 54.79 |
| GSMUA_Achr7P26810_001 | Banana | plastid | 35.6 | 53.04 |
| HORVU4Hr1G008950.1 | Barley | vacuole | 48.3 | 51.08 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 48.3 | 50.96 |
| TraesCS4A01G260900.2 | Wheat | extracellular, plasma membrane, vacuole | 48.3 | 50.96 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 48.3 | 50.35 |
| GSMUA_Achr6P31650_001 | Banana | extracellular, vacuole | 52.15 | 50.11 |
| Os03t0669300-02 | Rice | endoplasmic reticulum | 51.93 | 49.35 |
| EER95211 | Sorghum | extracellular, vacuole | 47.85 | 48.84 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 50.79 | 48.38 |
| TraesCS4A01G293500.1 | Wheat | plasma membrane | 51.02 | 48.08 |
| EER93548 | Sorghum | vacuole | 48.3 | 47.87 |
| Zm00001d013390_P001 | Maize | extracellular | 47.62 | 47.51 |
| GSMUA_Achr7P08120_001 | Banana | plastid | 34.24 | 46.89 |
| Os03t0722500-01 | Rice | extracellular, plasma membrane, vacuole | 47.62 | 46.88 |
| Zm00001d013573_P001 | Maize | extracellular, plasma membrane, vacuole | 49.21 | 46.87 |
| TraesCS4A01G077800.1 | Wheat | vacuole | 46.03 | 46.67 |
| HORVU4Hr1G065340.1 | Barley | extracellular, vacuole | 45.58 | 46.64 |
| KXG37872 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 50.11 | 46.53 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 49.66 | 46.5 |
| TraesCS4D01G235000.1 | Wheat | plasma membrane, vacuole | 46.03 | 46.35 |
| GSMUA_Achr3P30520_001 | Banana | cytosol, plastid, vacuole | 46.49 | 44.86 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 45.8 | 43.82 |
| Solyc03g082900.2.1 | Tomato | extracellular | 36.51 | 42.59 |
| HORVU4Hr1G003090.3 | Barley | extracellular, vacuole | 50.34 | 41.42 |
| Solyc11g068440.1.1 | Tomato | extracellular | 35.6 | 41.32 |
| Zm00001d028331_P001 | Maize | plastid | 47.17 | 40.0 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 34.24 | 37.84 |
| Solyc06g076170.2.1 | Tomato | extracellular | 37.87 | 37.19 |
| Solyc11g071520.1.1 | Tomato | extracellular | 31.75 | 36.55 |
| Solyc12g055840.1.1 | Tomato | nucleus | 34.92 | 36.49 |
| Solyc08g083310.2.1 | Tomato | nucleus | 33.79 | 35.22 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 31.07 | 35.13 |
| Solyc06g073710.2.1 | Tomato | golgi, mitochondrion, plastid, vacuole | 31.75 | 33.98 |
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 32.2 | 31.14 |
| Solyc07g005330.2.1 | Tomato | extracellular | 32.2 | 30.94 |
| Solyc12g014420.1.1 | Tomato | extracellular | 33.11 | 30.42 |
| Solyc07g049370.2.1 | Tomato | extracellular, vacuole | 32.2 | 30.34 |
| Solyc12g008580.1.1 | Tomato | extracellular | 34.01 | 30.24 |
| Solyc05g054440.2.1 | Tomato | unclear | 34.24 | 28.71 |
| Solyc12g098560.1.1 | Tomato | extracellular | 29.25 | 28.1 |
| Solyc09g057630.2.1 | Tomato | nucleus | 28.8 | 27.37 |
| Solyc08g005000.2.1 | Tomato | extracellular | 25.17 | 25.34 |
| Solyc04g007910.2.1 | Tomato | extracellular | 28.8 | 25.15 |
| Solyc02g080660.2.1 | Tomato | golgi, plasma membrane, vacuole | 21.09 | 22.52 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:K4BVA5 | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF228 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc04g080260.2 | EnsemblPlants:Solyc04g080260.2.1 | UniParc:UPI0002765871 | SEG:seg |
Description
No Description!
Coordinates
chr4:-:64497638..64500851
Molecular Weight (calculated)
47198.9 Da
IEP (calculated)
8.169
GRAVY (calculated)
-0.044
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLLHNSSF FLLLCLLHFV LVAKSQSFIG INYGQVADNL PAPEATAKLL QSTSIQKVRL YGSDPAIIKA LANTGIGIMI GVANGDIPAM ASDPNFAKGW
101: LSSNVLPFYP ASEIIVINVG NEVMSSNDQN LMTNLLPAMQ NLRKALNDVS IGGKIKVSTV HSMAVMKQSD PPSSGSFDPN IGDLLKGLLE FNKATGSPFA
201: INPYPFFAYQ SDPRPDTLAF CLFQPNAGRV DAGTKIKYTN MFDAQVDAIR AALNAMGFKE VEIVIAETGW PYKGDSNEVG PSIENAKAYN GNLIAHLRSM
301: VGTPLMPGKS VDTYLFAIYD EDLKPGPTSE RSFGLFKPDL TMSYDIGLSK ANNQVPTPKT PVSPSPNASP KAPVSLSPNP APKAPVTPTL VPTPNTTVTP
401: PSPKTEKSVK AGVSDSQSQA NINVGMLVLS QILWYPMLHM R
101: LSSNVLPFYP ASEIIVINVG NEVMSSNDQN LMTNLLPAMQ NLRKALNDVS IGGKIKVSTV HSMAVMKQSD PPSSGSFDPN IGDLLKGLLE FNKATGSPFA
201: INPYPFFAYQ SDPRPDTLAF CLFQPNAGRV DAGTKIKYTN MFDAQVDAIR AALNAMGFKE VEIVIAETGW PYKGDSNEVG PSIENAKAYN GNLIAHLRSM
301: VGTPLMPGKS VDTYLFAIYD EDLKPGPTSE RSFGLFKPDL TMSYDIGLSK ANNQVPTPKT PVSPSPNASP KAPVSLSPNP APKAPVTPTL VPTPNTTVTP
401: PSPKTEKSVK AGVSDSQSQA NINVGMLVLS QILWYPMLHM R
001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.