Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0006g00520.t01 | Wine grape | extracellular, plasma membrane, vacuole | 74.66 | 66.19 |
| KRH17336 | Soybean | plasma membrane | 72.37 | 63.65 |
| PGSC0003DMT400040463 | Potato | mitochondrion, vacuole | 81.96 | 63.54 |
| KRH30935 | Soybean | extracellular, plasma membrane, vacuole | 70.09 | 61.65 |
| KRG97940 | Soybean | extracellular, plasma membrane, vacuole | 69.86 | 61.45 |
| KRH72984 | Soybean | vacuole | 70.55 | 61.19 |
| AT1G66250.1 | Thale cress | vacuole | 66.89 | 58.02 |
| CDY16440 | Canola | extracellular | 66.67 | 57.94 |
| Solyc04g007910.2.1 | Tomato | extracellular | 66.67 | 57.82 |
| Bra039757.1-P | Field mustard | extracellular, vacuole | 66.21 | 57.43 |
| CDY58676 | Canola | extracellular, vacuole | 65.98 | 57.34 |
| Os03t0221500-01 | Rice | extracellular, plasma membrane, vacuole | 63.24 | 54.96 |
| EER95256 | Sorghum | extracellular, plasma membrane, vacuole | 61.64 | 53.78 |
| Zm00001d048055_P001 | Maize | plasma membrane | 61.42 | 53.69 |
| Zm00001d028243_P001 | Maize | plasma membrane | 61.42 | 53.59 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 63.47 | 53.56 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 59.36 | 52.0 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 59.13 | 51.8 |
| TraesCS4A01G064900.2 | Wheat | extracellular, plasma membrane, vacuole | 59.36 | 49.24 |
| HORVU4Hr1G067180.3 | Barley | extracellular, vacuole | 56.39 | 49.01 |
| Solyc02g080660.2.1 | Tomato | golgi, plasma membrane, vacuole | 42.47 | 45.04 |
| GSMUA_Achr2P21600_001 | Banana | mitochondrion, nucleus, plasma membrane | 65.3 | 41.57 |
| Solyc12g008580.1.1 | Tomato | extracellular | 36.07 | 31.85 |
| Solyc12g014420.1.1 | Tomato | extracellular | 34.7 | 31.67 |
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 32.42 | 31.14 |
| Solyc06g076170.2.1 | Tomato | extracellular | 31.28 | 30.51 |
| Solyc01g109570.2.1 | Tomato | extracellular | 32.88 | 30.44 |
| Solyc03g082900.2.1 | Tomato | extracellular | 26.26 | 30.42 |
| Solyc07g049370.2.1 | Tomato | extracellular, vacuole | 31.96 | 29.91 |
| Solyc09g057630.2.1 | Tomato | nucleus | 30.82 | 29.09 |
| Solyc07g005330.2.1 | Tomato | extracellular | 30.37 | 28.98 |
| Solyc11g071520.1.1 | Tomato | extracellular | 24.66 | 28.2 |
| Solyc12g098560.1.1 | Tomato | extracellular | 29.45 | 28.1 |
| Solyc12g055840.1.1 | Tomato | nucleus | 26.48 | 27.49 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 24.2 | 27.18 |
| Solyc11g068440.1.1 | Tomato | extracellular | 23.29 | 26.84 |
| Solyc06g073710.2.1 | Tomato | golgi, mitochondrion, plastid, vacuole | 24.89 | 26.46 |
| Solyc05g054440.2.1 | Tomato | unclear | 31.74 | 26.43 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 23.74 | 26.07 |
| Solyc08g083310.2.1 | Tomato | nucleus | 24.66 | 25.53 |
| Solyc04g080260.2.1 | Tomato | extracellular | 25.34 | 25.17 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:K4CHZ2 | PFAM:PF00332 | PFAM:PF07983 |
| ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF52 | SMART:SM00768 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc08g005000.2 | EnsemblPlants:Solyc08g005000.2.1 | UniParc:UPI000276B682 | InterPro:X8 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:-:2178..5917
Molecular Weight (calculated)
46685.5 Da
IEP (calculated)
5.296
GRAVY (calculated)
0.077
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: METNKSLLFL LFLAVSAVLA DEDVFIGVNI GTELSDMPHP TQVVALLKAQ QIRHVRLFNA DRGMLLALAN TGIKVAVSVP NEQILGVGQS NTTAANWVTQ
101: NIISHYPATN ITTICVGSEV LSALPNAAPI LVNALKFVHS ALLASNLDRQ IKVSTPLPLA ANKEAVDSNT LLHYTNVFDA MIDAAYFAMA DVNFTNIPVM
201: VTESGWPSVG ESNEPDATVD NANTYNSNLI KHVLNKTGTP KHPGIAVSTY IYELYNEDAK AGPLSEKNWG LFNNNGTPVY ILRLTESGSL FANNTSNQTY
301: CVAKEGADAK MLQAGLDWAC GTGKVNCAPL MQGGPCYDPD NVAAHATYAF DAYYHMMGKA PGTCDFTGVA TITTTNPSHG TCLFSSSNGK NATFLNGTAP
401: AMDSTSSSAY PARYLNNNAF STTLMMILGT LGFSMVLL
101: NIISHYPATN ITTICVGSEV LSALPNAAPI LVNALKFVHS ALLASNLDRQ IKVSTPLPLA ANKEAVDSNT LLHYTNVFDA MIDAAYFAMA DVNFTNIPVM
201: VTESGWPSVG ESNEPDATVD NANTYNSNLI KHVLNKTGTP KHPGIAVSTY IYELYNEDAK AGPLSEKNWG LFNNNGTPVY ILRLTESGSL FANNTSNQTY
301: CVAKEGADAK MLQAGLDWAC GTGKVNCAPL MQGGPCYDPD NVAAHATYAF DAYYHMMGKA PGTCDFTGVA TITTTNPSHG TCLFSSSNGK NATFLNGTAP
401: AMDSTSSSAY PARYLNNNAF STTLMMILGT LGFSMVLL
001: MASLLHLLLL SLSLLVLASA SPSPPADEGS YIGVNIGTDL SDMPHPTQVV ALLKAQEIRH IRLYNADPGL LIALANTGIK VIISIPNDQL LGIGQSNSTA
101: ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY
201: LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR
301: HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ
401: GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN
501: VANIL
101: ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY
201: LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR
301: HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ
401: GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN
501: VANIL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7U5]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.