Factsheet for Zm00001d028243_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95256	Sorghum	extracellular, plasma membrane, vacuole	96.22	96.22
Zm00001d048055_P001	Maize	plasma membrane	95.82	96.01
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	91.63	91.27
TraesCS4D01G241900.1	Wheat	extracellular	87.65	88.0
TraesCS4B01G242300.1	Wheat	extracellular	87.45	87.8
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	87.65	83.33
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	79.88	79.56
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	72.11	72.69
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	73.71	71.29
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	66.93	68.02
KRH70129	Soybean	cytosol	66.33	67.96
Solyc04g007910.2.1	Tomato	extracellular	68.33	67.92
KRH41666	Soybean	plasma membrane	67.13	67.54
PGSC0003DMT400075818	Potato	extracellular	67.73	67.33
KRH17336	Soybean	plasma membrane	66.53	67.07
KRH08471	Soybean	extracellular	66.14	66.94
CDY48807	Canola	extracellular	65.14	65.79
CDY09427	Canola	extracellular	65.14	65.79
Bra026644.1-P	Field mustard	extracellular	65.14	65.79
KRH72984	Soybean	vacuole	66.14	65.74
KRH30935	Soybean	extracellular, plasma membrane, vacuole	64.14	64.66
CDY16440	Canola	extracellular	64.54	64.29
AT2G01630.1	Thale cress	extracellular	64.14	64.27
KRG97940	Soybean	extracellular, plasma membrane, vacuole	63.74	64.26
Bra039757.1-P	Field mustard	extracellular, vacuole	64.34	63.96
CDY58676	Canola	extracellular, vacuole	63.74	63.49
AT1G66250.1	Thale cress	vacuole	62.55	62.18
Solyc08g005000.2.1	Tomato	extracellular	53.59	61.42
KRH60366	Soybean	extracellular	67.93	59.1
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	74.7	54.51
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	59.16	52.57
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	43.63	44.51
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	44.02	44.2
Zm00001d043524_P001	Maize	plasma membrane	38.45	38.91
Zm00001d021598_P005	Maize	plasma membrane	50.2	38.3
Zm00001d018214_P001	Maize	extracellular	36.85	37.91
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	34.66	37.58
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	33.27	37.11
Zm00001d004768_P001	Maize	extracellular	32.27	35.68
Zm00001d042767_P001	Maize	plasma membrane	29.08	35.27
Zm00001d010137_P001	Maize	extracellular	28.29	35.06
Zm00001d031571_P001	Maize	extracellular	33.27	34.65
Zm00001d028410_P001	Maize	vacuole	24.7	34.35
Zm00001d012292_P001	Maize	mitochondrion	28.69	33.8
Zm00001d036051_P001	Maize	extracellular, vacuole	28.49	33.57
Zm00001d000117_P001	Maize	plastid, vacuole	26.29	33.25
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.89	33.17
Zm00001d030361_P001	Maize	plasma membrane	26.49	32.92
Zm00001d021024_P001	Maize	extracellular	31.27	32.78
Zm00001d004763_P001	Maize	extracellular	30.68	32.63
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	25.5	32.41
Zm00001d046534_P001	Maize	plasma membrane	25.3	32.23
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	26.29	31.58
Zm00001d013390_P001	Maize	extracellular	27.09	30.77
Zm00001d021690_P001	Maize	extracellular	34.26	29.45
Zm00001d019248_P001	Maize	extracellular, vacuole	26.89	27.11
Zm00001d028331_P001	Maize	plastid	27.49	26.54
Zm00001d006538_P001	Maize	vacuole	33.07	25.58
Zm00001d021695_P001	Maize	extracellular	31.47	24.42
Zm00001d021697_P001	Maize	extracellular	32.47	23.45

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100191471	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:B4F8X5	EMBL:BT033563
EMBL:BT085958	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	ProteinID:ONL95171.1	PFAM:PF00332
PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI00017B610A	InterPro:X8	EnsemblPlantsGene:Zm00001d028243	EnsemblPlants:Zm00001d028243_P001	EnsemblPlants:Zm00001d028243_T001	SEG:seg

Description

Glucan endo-13-beta-glucosidase 3

Coordinates

chr1:+:27817413..27821834

Molecular Weight (calculated)

53513.6 Da

IEP (calculated)

5.682

GRAVY (calculated)

0.106

Length

502 amino acids

Sequence
(BLAST)

001: MRKLLFISFV LSLSAAAVHG EDGAYIGVNI GTAMSSVPAP TQITTLLRSQ NIRHVRLYDA DPAMLAALSN TGIRVIVSVP NEQLLAIGNS NATAANWVAR
101: NVAAHFPAVN ITAIAVGSEV LSAQPSAAPL LMPAMRYLQN ALVAAALDRY IKVSTPHSSS IILDSFPPSQ AFFNRSLDGV LVPMLRFLQS TGSPLMLNVY
201: PYYDYMRSNG VIPLDYALFR PLPPNKEAVD ANTLLHYTNV FDAVVDAAYF AMAYLNVTNV PVMVTETGWP HKGDSSSEPD ATSDNADTYN SNLIRHVMNS
301: TGTPKHPGVA VPTYVYELYD EDTRPGSTSE KYWGLFDMNG VPAYTLHLTG SGVLLANDTT NQTYCVAREG ADPKMLQAAL DWACGPGKVD CSVLMQGQPC
401: YDPDTVDAHA TYAFNAYYHG MGMGSGTCYF SGVAVVTTTD PSHGSCVYAG KNGTSLMNGT SLAPSSNSTE GGSGAHRAFG DVSSLVRIVS TALLFSVVLL
501: LL

Best Arabidopsis Sequence Match ( AT2G01630.1 )
(BLAST)

001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.