Factsheet for VIT_01s0011g05500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41666	Soybean	plasma membrane	78.71	78.56
KRH70129	Soybean	cytosol	76.91	78.16
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	77.31	77.94
KRH08471	Soybean	extracellular	77.51	77.82
Solyc04g007910.2.1	Tomato	extracellular	78.11	77.03
PGSC0003DMT400075818	Potato	extracellular	77.71	76.63
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	74.5	73.61
EER95256	Sorghum	extracellular, plasma membrane, vacuole	73.09	72.51
Zm00001d048055_P001	Maize	plasma membrane	72.69	72.26
Zm00001d028243_P001	Maize	plasma membrane	72.69	72.11
TraesCS4D01G241900.1	Wheat	extracellular	71.08	70.8
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	73.69	70.71
TraesCS4B01G242300.1	Wheat	extracellular	70.88	70.6
KRH60366	Soybean	extracellular	79.12	68.28
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	70.88	66.86
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	66.27	65.48
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	75.3	54.51
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	47.59	50.11
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	56.63	49.74
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	38.15	40.34
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	39.76	40.08
VIT_16s0098g01560.t01	Wine grape	extracellular	36.35	39.26
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	36.75	38.85
VIT_18s0122g00980.t01	Wine grape	extracellular	35.34	38.26
VIT_06s0004g04750.t01	Wine grape	extracellular	27.11	37.5
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	34.34	36.62
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	33.94	36.34
VIT_09s0002g06880.t01	Wine grape	vacuole	28.51	35.59
VIT_10s0003g03690.t01	Wine grape	extracellular	26.71	35.47
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	31.73	35.35
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	27.71	35.03
VIT_02s0025g02770.t01	Wine grape	extracellular	27.91	34.32
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	33.13	33.67
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	27.71	33.66

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100256139	wikigene:100256139	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CBI26850
ProteinID:CBI26850.3	UniProt:D7T8M9	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100256139	wikigene:LOC100256139	PFAM:PF00332
PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0001BE2E44	ArrayExpress:VIT_01s0011g05500	EnsemblPlantsGene:VIT_01s0011g05500	EnsemblPlants:VIT_01s0011g05500.t01	InterPro:X8
RefSeq:XP_003631173	RefSeq:XP_003631173.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:5138977..5143959

Molecular Weight (calculated)

53520.7 Da

IEP (calculated)

5.100

GRAVY (calculated)

0.134

Length

498 amino acids

Sequence
(BLAST)

001: MVPFLFLLLL VVSGTVADED AFIGVNIGTD LSNMPNPTQV VALLKSQQIR HVRLYDADRA MLLALANTGI RVTVSVPNDQ LLGIGQSNAT AANWVARNVL
101: AHIPATNITA IAVGSEVLTT LPNAAPVLVS ALKFIHSALV AANLDSQIKV STPHSSSILL DSFPPSQAFF NRSWEPVMVP LLKFLQSTSS YLMLNVYPYY
201: DYMQSNSVIP LDYALFRPLP PNKEAVDANT LLHYTNVFDA VVDAAFFAMS YLNFTNIPLV VLESGWPSKG GSSEPDATID NANTYNSNLI RHVLNNTGTP
301: KHPGIAVSTY IYELYNEDLR PGSVSEKNWG LFDANGMPVY ILHLTGSGTV LANDTTNQTY CVARDGADPK MLQAALDWAC GPGKVDCSPL LQGQPCSEPD
401: NVVAHATYAF DAYYHQMAMG QGTCYFNGVA TITTTDPSHG SCKFPGSAGR NNTFINGTSL APSSNSTSSG SQSQYFYSSG ALMSCMIIGI LVWSAVLL

Best Arabidopsis Sequence Match ( AT2G01630.1 )
(BLAST)

001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.