Factsheet for VIT_06s0004g04750.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	52.22	42.06
VIT_10s0003g03690.t01	Wine grape	extracellular	39.44	37.87
VIT_16s0098g01560.t01	Wine grape	extracellular	46.39	36.23
VIT_02s0025g02770.t01	Wine grape	extracellular	38.61	34.32
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	38.61	33.9
VIT_09s0002g06880.t01	Wine grape	vacuole	36.39	32.83
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	42.22	32.69
VIT_18s0122g00980.t01	Wine grape	extracellular	41.67	32.61
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	43.33	31.84
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	34.44	31.47
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	39.72	30.36
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	38.06	29.09
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	37.5	28.91
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	38.33	27.94
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	37.5	27.11
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	36.11	26.32
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	33.61	25.58
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	35.83	22.75

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100253587	wikigene:100253587	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:AM479562
ProteinID:CAN72975	ProteinID:CAN72975.1	ProteinID:CBI16129	ProteinID:CBI16129.3	UniProt:D7SKF3	EMBL:FN594951
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100253587
wikigene:LOC100253587	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF142	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0001BE0E7D	ArrayExpress:VIT_06s0004g04750	EnsemblPlantsGene:VIT_06s0004g04750	EnsemblPlants:VIT_06s0004g04750.t01	RefSeq:XP_002281025	RefSeq:XP_002281025.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:5683252..5684428

Molecular Weight (calculated)

39171.1 Da

IEP (calculated)

5.343

GRAVY (calculated)

0.058

Length

360 amino acids

Sequence
(BLAST)

001: MAAKLPSLLL LLVLFHNLSA VYSIGVNYGT VADNLASPSE VAAFIKDKTI FDRVKIFDTN PDIINAFANT GIGLTVTVVN LDIPKLVHPN EATNWVATNI
101: VPFYQKTKIN YICVGNEITM SGISDLIVNL VPAMKAIHAA LQAAGINDIK VTTPHPFSIM ASSSPPSSGK FAMEFEQSLL IPMLQFHRET NSPFMVNPYP
201: YFAYSGDLRN FLLFGENEGA HDQATGLTYT NMFDAMVDSV YSAMKSAGFG DVSLVVGETG WSSVGDPGRG IGMEEAKLYN SNLIKHITSG KGTPLMPGKP
301: LETYIFALFN ENQKPGPSEQ NFGLLKPDFS PVYESGCLRG GQQVQEFETA QVIFKNMVRS

Best Arabidopsis Sequence Match ( AT3G46570.1 )
(BLAST)

001: MLGSRVVHQL YFLILTLILP FSAAYQVGVN YGTVANNLPP PHQVVNFIKT KTIINHVKIF DTNHDILAAF SGITGISLTV TVPNSDIISL SKLSNARSWL
101: SDNLLPFLLT TSIRYIAVGN EVVATSDKTL ITHLLPAMET LTLALHLANV SRILVSTPHS LGILSGSSEP PSSGKFRKGY DKAIFSPILD FHNRTKSPFM
201: VNPYPYFGFG PETLNYALFN TNDVVYVDPV TKLNYTNMFD AQLDAVYSAM KRFGYGDVDI VVAETGWPSA GEPNQTGVGL DYAAAYNGNL IKHVNSGKGT
301: PLMPNRVFET YVFSLFNENL KSSVSEQNFG LFKPDFTPVY DVGIMKTNKV YTLQLL

Arabidopsis Description

Glucosidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNC1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.