Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- endoplasmic reticulum 5
- plastid 1
- plasma membrane 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033641.1-P | Field mustard | extracellular, vacuole | 83.11 | 84.26 |
| CDY22386 | Canola | extracellular, vacuole | 82.88 | 84.03 |
| CDX71547 | Canola | extracellular, vacuole | 81.74 | 82.11 |
| VIT_18s0001g12390.t01 | Wine grape | extracellular, vacuole | 59.13 | 55.7 |
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 54.79 | 54.42 |
| Solyc04g080260.2.1 | Tomato | extracellular | 54.79 | 54.42 |
| KRH15221 | Soybean | extracellular | 59.36 | 53.72 |
| Os03t0227400-01 | Rice | plasma membrane | 42.92 | 51.51 |
| HORVU4Hr1G008950.1 | Barley | vacuole | 46.58 | 48.92 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 46.35 | 48.56 |
| TraesCS4A01G260900.2 | Wheat | extracellular, plasma membrane, vacuole | 46.35 | 48.56 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 46.58 | 48.23 |
| AT2G16230.1 | Thale cress | vacuole | 55.02 | 47.91 |
| GSMUA_Achr6P31650_001 | Banana | extracellular, vacuole | 50.0 | 47.71 |
| GSMUA_Achr7P26810_001 | Banana | plastid | 32.19 | 47.64 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 54.79 | 47.62 |
| EER93548 | Sorghum | vacuole | 47.49 | 46.74 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 49.09 | 46.44 |
| Os03t0669300-02 | Rice | endoplasmic reticulum | 49.09 | 46.34 |
| GSMUA_Achr7P08120_001 | Banana | plastid | 33.79 | 45.96 |
| Zm00001d013390_P001 | Maize | extracellular | 46.35 | 45.93 |
| TraesCS4A01G293500.1 | Wheat | plasma membrane | 48.86 | 45.73 |
| EER95211 | Sorghum | extracellular, vacuole | 44.52 | 45.14 |
| Os03t0722500-01 | Rice | extracellular, plasma membrane, vacuole | 45.89 | 44.87 |
| TraesCS4A01G077800.1 | Wheat | vacuole | 44.52 | 44.83 |
| TraesCS4D01G235000.1 | Wheat | plasma membrane, vacuole | 44.52 | 44.52 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 47.72 | 44.37 |
| GSMUA_Achr3P30520_001 | Banana | cytosol, plastid, vacuole | 46.12 | 44.2 |
| HORVU4Hr1G065340.1 | Barley | extracellular, vacuole | 43.38 | 44.08 |
| Zm00001d013573_P001 | Maize | extracellular, plasma membrane, vacuole | 46.12 | 43.63 |
| KXG37872 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 47.03 | 43.37 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 43.84 | 41.65 |
| AT3G46570.1 | Thale cress | vacuole | 32.88 | 40.45 |
| HORVU4Hr1G003090.3 | Barley | extracellular, vacuole | 49.32 | 40.3 |
| AT1G30080.1 | Thale cress | vacuole | 37.44 | 40.2 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 35.16 | 38.6 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 34.02 | 38.4 |
| AT2G27500.1 | Thale cress | vacuole | 34.25 | 38.27 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.76 | 37.79 |
| Zm00001d028331_P001 | Maize | plastid | 44.29 | 37.31 |
| AT4G18340.1 | Thale cress | vacuole | 33.33 | 36.78 |
| AT5G24318.1 | Thale cress | extracellular | 37.21 | 35.59 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 34.47 | 35.53 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 35.39 | 32.84 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 34.02 | 32.46 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 33.79 | 31.83 |
| AT3G55430.1 | Thale cress | extracellular | 32.42 | 31.63 |
| AT4G29360.2 | Thale cress | vacuole | 37.67 | 30.33 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 34.47 | 29.84 |
| AT2G01630.1 | Thale cress | extracellular | 33.56 | 29.34 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 30.14 | 28.7 |
| AT3G23770.1 | Thale cress | extracellular | 30.14 | 27.73 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 32.19 | 27.59 |
| AT4G14080.1 | Thale cress | vacuole | 29.68 | 27.2 |
| AT3G13560.4 | Thale cress | plasma membrane | 31.05 | 26.93 |
| AT1G66250.1 | Thale cress | vacuole | 30.59 | 26.53 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 30.37 | 24.23 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:834281 | ProteinID:AED94854.1 | ArrayExpress:AT5G42720 |
| EnsemblPlantsGene:AT5G42720 | RefSeq:AT5G42720 | TAIR:AT5G42720 | RefSeq:AT5G42720-TAIR-G | EnsemblPlants:AT5G42720.1 | TAIR:AT5G42720.1 |
| EMBL:AY074288 | EMBL:AY150489 | Unigene:At.46813 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0031225 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_199086.2 | PFAM:PF00332 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51257 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF221 | UniProt:Q8VY12 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| UniParc:UPI00000AC2B8 | SEG:seg | : | : | : | : |
Description
Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q8VY12]
Coordinates
chr5:+:17130186..17132909
Molecular Weight (calculated)
47171.6 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.020
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MRASVYSLIL LFFSCLLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGS DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVET
101: NVVPYYPASK IVLIAVGNEI TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA DILKGLLEFN SETGSPFAVN
201: PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG
301: TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT
401: DVHNSTPRSA SLAHICRSLS ISASMFFVSV LYALIILL
101: NVVPYYPASK IVLIAVGNEI TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA DILKGLLEFN SETGSPFAVN
201: PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG
301: TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT
401: DVHNSTPRSA SLAHICRSLS ISASMFFVSV LYALIILL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.