Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- endoplasmic reticulum 5
- plastid 2
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028343.1-P | Field mustard | extracellular, vacuole | 89.5 | 89.5 |
| CDY18092 | Canola | extracellular, vacuole | 89.5 | 89.5 |
| CDY50110 | Canola | extracellular, vacuole | 89.5 | 89.5 |
| CDY59775 | Canola | extracellular, vacuole | 88.03 | 88.4 |
| CDY67322 | Canola | extracellular | 40.76 | 87.78 |
| CDY63754 | Canola | extracellular, vacuole | 87.82 | 87.45 |
| Bra014979.1-P | Field mustard | extracellular, vacuole | 87.61 | 87.24 |
| CDY53213 | Canola | extracellular, vacuole | 85.29 | 84.58 |
| Bra001918.1-P | Field mustard | extracellular, vacuole | 85.08 | 84.38 |
| AT4G14080.1 | Thale cress | vacuole | 73.74 | 73.43 |
| KRH20365 | Soybean | extracellular, vacuole | 51.05 | 62.15 |
| Solyc12g098560.1.1 | Tomato | extracellular | 55.46 | 57.52 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 50.84 | 52.61 |
| GSMUA_Achr8P08800_001 | Banana | peroxisome, plastid, vacuole | 41.6 | 50.9 |
| GSMUA_Achr11P... | Banana | extracellular | 44.75 | 48.52 |
| EER99139 | Sorghum | endoplasmic reticulum, plasma membrane | 48.53 | 47.83 |
| Zm00001d021024_P001 | Maize | extracellular | 48.11 | 47.81 |
| TraesCS7D01G257600.1 | Wheat | extracellular, vacuole | 47.06 | 47.66 |
| HORVU5Hr1G075510.2 | Barley | plasma membrane, vacuole | 48.53 | 47.34 |
| Os08t0525800-00 | Rice | extracellular, mitochondrion, vacuole | 45.8 | 46.78 |
| Os09t0502200-01 | Rice | extracellular | 46.85 | 46.46 |
| EES14212 | Sorghum | extracellular | 47.06 | 46.28 |
| Zm00001d031571_P001 | Maize | extracellular | 46.43 | 45.85 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 43.07 | 45.15 |
| TraesCS7A01G256800.1 | Wheat | vacuole | 46.64 | 44.94 |
| TraesCS7B01G153600.1 | Wheat | vacuole | 46.43 | 44.83 |
| Os03t0845600-01 | Rice | extracellular, vacuole | 43.91 | 44.09 |
| TraesCS5D01G400400.1 | Wheat | extracellular | 44.33 | 42.71 |
| TraesCS5A01G390600.1 | Wheat | extracellular | 43.91 | 42.31 |
| EER90524 | Sorghum | extracellular | 42.65 | 42.03 |
| Zm00001d004763_P001 | Maize | extracellular | 41.6 | 41.95 |
| TraesCS5B01G279000.2 | Wheat | extracellular | 47.9 | 40.93 |
| HORVU5Hr1G095380.1 | Barley | cytosol | 25.42 | 38.53 |
| AT3G46570.1 | Thale cress | vacuole | 28.78 | 38.48 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 36.13 | 36.44 |
| AT5G24318.1 | Thale cress | extracellular | 34.03 | 35.37 |
| AT3G55430.1 | Thale cress | extracellular | 33.19 | 35.19 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 33.4 | 34.64 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 28.78 | 34.34 |
| AT2G27500.1 | Thale cress | vacuole | 28.15 | 34.18 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 30.25 | 33.8 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 32.77 | 33.55 |
| AT4G18340.1 | Thale cress | vacuole | 27.94 | 33.5 |
| AT1G30080.1 | Thale cress | vacuole | 28.15 | 32.84 |
| AT2G01630.1 | Thale cress | extracellular | 34.45 | 32.73 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 28.99 | 32.47 |
| AT1G66250.1 | Thale cress | vacuole | 34.24 | 32.28 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 26.26 | 32.22 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 33.82 | 31.82 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 33.61 | 31.75 |
| AT3G13560.4 | Thale cress | plasma membrane | 33.61 | 31.68 |
| AT2G16230.1 | Thale cress | vacuole | 32.98 | 31.21 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 33.19 | 30.92 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 27.73 | 30.14 |
| AT4G29360.2 | Thale cress | vacuole | 34.24 | 29.96 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 31.3 | 27.14 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:821959 | ProteinID:AEE76811.1 | ArrayExpress:AT3G23770 |
| EnsemblPlantsGene:AT3G23770 | RefSeq:AT3G23770 | TAIR:AT3G23770 | RefSeq:AT3G23770-TAIR-G | EnsemblPlants:AT3G23770.1 | TAIR:AT3G23770.1 |
| Unigene:At.37655 | ProteinID:BAB01853.1 | EMBL:DQ446688 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010584 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| RefSeq:NP_189019.1 | PFAM:PF00332 | PFAM:PF07983 | PO:PO:0007611 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0025022 | ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF122 | UniProt:Q9LK41 | SMART:SM00768 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0000048766 | InterPro:X8 | SEG:seg | : |
Description
Beta-1,3-glucanase [Source:UniProtKB/TrEMBL;Acc:Q9LK41]
Coordinates
chr3:+:8565494..8567496
Molecular Weight (calculated)
52173.0 Da
IEP (calculated)
7.435
GRAVY (calculated)
-0.092
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPFALFLFT LLALSSSCCS AIGPQNNRTV LALASRIGIN YGKLGNNLPF PYQSINLIKT IKAGHVKLYD ADPETLKLLS TTNLYVTIMV PNNQIISIGA
101: DQAAADNWVA TNVLPFHPQT RIRFVLVGNE VLSYSSDQDK QIWANLVPAM RKVVNSLRAR GIHNIKVGTP LAMDALRSSF PPSSGTFRED IAVPVMLPLL
201: KFLNGTNSFF FLDVYPYFPW STDPVNNHLD FALFESNSTY TDPQTGLVYT NLLDQMLDSV IFAMTKLGYP NISLAISETG WPNDGDIHET GANIVNAATY
301: NRNLIKKMTA NPPLGTPARR GAPIPTFLFS LFNENQKPGS GTERHWGILN PDGTPIYDID FSGRRSFSGF DSLPKPSNNV PFKGNVWCVA VDGADEAELG
401: QALNFACGRS NATCAALAPG GECYAPVTVT WHASYAFSSY WAQFRNQSSQ CYFNGLARET TTNPGNERCK FPSVTL
101: DQAAADNWVA TNVLPFHPQT RIRFVLVGNE VLSYSSDQDK QIWANLVPAM RKVVNSLRAR GIHNIKVGTP LAMDALRSSF PPSSGTFRED IAVPVMLPLL
201: KFLNGTNSFF FLDVYPYFPW STDPVNNHLD FALFESNSTY TDPQTGLVYT NLLDQMLDSV IFAMTKLGYP NISLAISETG WPNDGDIHET GANIVNAATY
301: NRNLIKKMTA NPPLGTPARR GAPIPTFLFS LFNENQKPGS GTERHWGILN PDGTPIYDID FSGRRSFSGF DSLPKPSNNV PFKGNVWCVA VDGADEAELG
401: QALNFACGRS NATCAALAPG GECYAPVTVT WHASYAFSSY WAQFRNQSSQ CYFNGLARET TTNPGNERCK FPSVTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.