Factsheet for TraesCS6A01G164100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G148900.1	Wheat	plastid	96.35	95.26
TraesCS6B01G188000.1	Wheat	plastid	95.89	95.02
HORVU6Hr1G032490.1	Barley	plastid	94.52	92.83
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	65.75	67.92
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	61.64	64.59
KXG29738	Sorghum	golgi, mitochondrion, vacuole	61.87	64.52
TraesCS7A01G378100.1	Wheat	golgi, vacuole	51.37	56.39
TraesCS2A01G294700.1	Wheat	plasma membrane	36.07	40.51
TraesCS1A01G055900.1	Wheat	extracellular	26.48	40.14
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	36.99	39.71
TraesCS1A01G276200.1	Wheat	vacuole	36.76	39.27
TraesCS3A01G249500.1	Wheat	vacuole	34.93	38.83
TraesCS4A01G067900.1	Wheat	vacuole	35.84	37.56
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	33.79	36.54
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	33.79	36.45
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	34.93	35.66
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	32.88	34.45
TraesCS5A01G329700.1	Wheat	vacuole	28.77	32.06
TraesCS4A01G077800.1	Wheat	vacuole	31.74	31.95
TraesCS4A01G293500.1	Wheat	plasma membrane	33.79	31.62
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	25.8	31.13
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	31.96	30.11
TraesCS2A01G439500.1	Wheat	extracellular	30.14	28.7
TraesCS4A01G175900.1	Wheat	extracellular	29.0	27.55
TraesCS5A01G390600.1	Wheat	extracellular	30.59	27.13
TraesCS3A01G277100.2	Wheat	vacuole	30.37	26.92
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	29.0	26.35
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	29.45	26.17
TraesCS7A01G256800.1	Wheat	vacuole	29.0	25.71
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	29.22	24.06
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	28.54	23.67
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	25.57	22.72
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	28.54	22.69
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	28.77	22.58
TraesCS5A01G155600.1	Wheat	plasma membrane	25.57	22.54
TraesCS1A01G422500.1	Wheat	vacuole	27.85	21.4

Protein Annotations

EnsemblPlants:TraesCS6A01G164100.1	EnsemblPlantsGene:TraesCS6A01G164100	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF223	PFAM:PF00332	SEG:seg	SUPFAM:SSF51445
MapMan:50.3.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:162033880..162035366

Molecular Weight (calculated)

48117.0 Da

IEP (calculated)

9.977

GRAVY (calculated)

-0.113

Length

438 amino acids

Sequence
(BLAST)

001: MPCTSSKVAP RPSSNAPPTT GHSLLLLFLL QSPPRALPAT CSPPRRKTMA VTPRGRPDSS LGHRRPVLLL LLFFCLLAFF PRRVAAFHSF VGTYGVNYGR
101: IADNLPPPTE VVKLLQMARI KNVRIFDSDH TVLDAFRNSG LNLAIAIPNG LVKDISATPS KAMDWVNENV RPYYPSTRIV AIIVGNEILG GQDTGLAEAL
201: FGAVVNIHDA LRAMRLSGRI EVNTPHSEAV FGTSYPPSAG TFRPDLMPYL KPLLDFFSKT GAPFYVNAYP FLAYMSDPEH IDVNYALMKP NAGILDQKTN
301: LHYDNMFEAQ IDATYAALEA AGYSDMEVRV SETGWASAGD ATEPGATLEN ARTYNFNLRK RLFLRKGTPY RPKRVVKAFI FALFNEDLKT GPGSERHFGL
401: FKPDGSVSLD LGFKGLTSSS SSIKGWKIAR QISKPAFT

Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)

001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.