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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG99621 Soybean nucleus 90.15 90.15
VIT_05s0062g01430.t01 Wine grape extracellular, vacuole 66.6 66.6
CDY08004 Canola vacuole 65.1 66.09
PGSC0003DMT400022520 Potato extracellular, vacuole 65.52 65.95
Bra029639.1-P Field mustard vacuole 64.67 65.65
CDY28063 Canola vacuole 64.67 65.65
CDY24629 Canola vacuole 64.45 65.43
CDY45466 Canola vacuole 64.45 65.43
Solyc09g057630.2.1 Tomato nucleus 64.67 65.09
AT3G07320.1 Thale cress extracellular, vacuole 63.38 64.35
GSMUA_Achr8P08800_001 Banana peroxisome, plastid, vacuole 47.54 57.07
KRH20365 Soybean extracellular, vacuole 45.4 54.22
GSMUA_Achr11P... Banana extracellular 50.96 54.21
Bra001245.1-P Field mustard vacuole 64.45 53.18
CDX74052 Canola vacuole 64.03 52.73
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 52.68 50.41
GSMUA_AchrUn_... Banana extracellular, vacuole 48.61 50.0
Zm00001d021024_P001 Maize extracellular 50.75 49.48
Os09t0502200-01 Rice extracellular 50.54 49.17
EER99139 Sorghum endoplasmic reticulum, plasma membrane 50.75 49.07
EES14212 Sorghum extracellular 50.54 48.76
TraesCS7D01G257600.1 Wheat extracellular, vacuole 48.39 48.09
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 47.97 48.07
Zm00001d031571_P001 Maize extracellular 48.18 46.68
Os03t0845600-01 Rice extracellular, vacuole 46.9 46.2
EER90524 Sorghum extracellular 47.54 45.96
TraesCS7B01G153600.1 Wheat vacuole 48.39 45.84
TraesCS7A01G256800.1 Wheat vacuole 48.18 45.55
TraesCS5A01G390600.1 Wheat extracellular 47.75 45.14
TraesCS5D01G400400.1 Wheat extracellular 47.54 44.94
Zm00001d004763_P001 Maize extracellular 44.75 44.28
TraesCS5B01G279000.2 Wheat extracellular 51.82 43.45
HORVU5Hr1G095380.1 Barley cytosol 27.62 41.08
KRH14333 Soybean endoplasmic reticulum, extracellular 40.47 41.0
KRH73361 Soybean extracellular, vacuole 39.61 39.19
KRH73795 Soybean extracellular, vacuole 39.61 39.19
KRH14776 Soybean extracellular, vacuole 38.54 37.74
KRH01668 Soybean extracellular 36.4 37.28
KRH22675 Soybean vacuole 31.05 36.99
KRH24481 Soybean cytosol 27.84 36.11
KRH51533 Soybean endoplasmic reticulum, extracellular, vacuole 34.9 35.51
KRH60849 Soybean endoplasmic reticulum, extracellular, vacuole 34.9 35.51
KRH30421 Soybean extracellular, plasma membrane, vacuole 29.76 35.37
KRH25239 Soybean extracellular, plasma membrane, vacuole 29.55 35.2
KRH60198 Soybean extracellular, plasma membrane, vacuole 37.26 34.87
KRH41480 Soybean extracellular, plasma membrane, vacuole 37.05 34.74
KRH52523 Soybean extracellular, plasma membrane, vacuole 25.7 34.68
KRH15221 Soybean extracellular 35.76 34.5
KRG89350 Soybean extracellular, vacuole 28.91 33.75
KRH70129 Soybean cytosol 35.12 33.47
KRH08471 Soybean extracellular 35.55 33.47
KRH11184 Soybean endoplasmic reticulum, extracellular, vacuole 28.48 33.42
KRH47445 Soybean extracellular, vacuole 27.84 33.33
KRH34248 Soybean extracellular, plasma membrane, vacuole 29.55 33.33
KRH21069 Soybean vacuole 28.27 33.08
KRH41666 Soybean plasma membrane 35.33 33.07
KRH26646 Soybean extracellular, plasma membrane, vacuole 30.19 33.02
KRH17336 Soybean plasma membrane 35.12 32.93
KRH44462 Soybean extracellular, vacuole 27.41 32.9
KRH09724 Soybean extracellular, plasma membrane, vacuole 26.77 32.38
KRH30935 Soybean extracellular, plasma membrane, vacuole 34.05 31.93
KRG97940 Soybean extracellular, plasma membrane, vacuole 33.83 31.73
KRH72984 Soybean vacuole 34.05 31.49
KRH05027 Soybean extracellular, plasma membrane, vacuole 33.4 31.33
KRH20124 Soybean golgi, vacuole 25.91 31.19
KRH50394 Soybean extracellular, vacuole 28.69 30.8
KRG89415 Soybean extracellular, vacuole 23.55 30.64
KRH51109 Soybean vacuole 34.26 30.59
KRH16072 Soybean extracellular, plasma membrane, vacuole 32.76 30.54
KRH23581 Soybean extracellular, vacuole 23.34 30.36
KRH11452 Soybean extracellular, vacuole 21.63 30.06
KRH02051 Soybean mitochondrion, vacuole 34.69 29.67
KRH42823 Soybean extracellular, plasma membrane, vacuole 31.48 29.64
KRH58918 Soybean endoplasmic reticulum 31.26 29.44
KRH60366 Soybean extracellular 35.76 28.94
KRH03678 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 25.7 28.71
Protein Annotations
KEGG:00500+3.2.1.39EntrezGene:100815282Gene3D:3.20.20.80MapMan:50.3.2EMBL:ACUP02005352EnsemblPlantsGene:GLYMA_08G346800
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016787
GO:GO:0016798GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
UniProt:I1KZ22EnsemblPlants:KRH46623ProteinID:KRH46623ProteinID:KRH46623.1PFAM:PF00332PFAM:PF07983
ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF230SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTM
UniParc:UPI00023CAA7AInterPro:X8SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:46154466..46157432
Molecular Weight (calculated)
51379.8 Da
IEP (calculated)
9.705
GRAVY (calculated)
-0.070
Length
467 amino acids
Sequence
(BLAST)
001: MAMLLLIPLF LSSIALFTIS SATTFSTHPG ICYGQLGDNL PPPQKSVSLI TSLHAKRVKL YDANPAILHA LRDTSLQVSI MVPNDLIVNI SRNQSLSDKW
101: VSDNVVPYHP RTLIRYLLVG NEVTSSTAPN GTWPYLVPAM RRIKHSLKSL GIRKVKVGTS SAIDVLEASF PPSNGAFRKD LSAPVMKPML KFLNRTKSFF
201: FLDVYPFFSW SADPLNINLD YALFQSKNLT VTDPGTGLVY TNLFDQMVDA VYFAMNRLGF PGVRIFIAET GWPNGGDLDQ IGANIFNAAT YNRNFIKKVT
301: RKPWLGTPAR PGSALPSFLF ALFNENQKPG PGTERHFGLL HPNGSRVYDV DLSGETPEAG FRPLPVPENN EKFKGEIWCV AARPHNATAL AAALAYACSQ
401: GNGTCDPIQP KGKCFKPDSV FWHASYAFSA YWAQFRKVGG TCYFNGLATQ TAKDPSYGSC KFPSVTL
Best Arabidopsis Sequence Match ( AT3G07320.1 )
(BLAST)
001: MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN
101: ILPFYPTTKI RYLLVGNEIL SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI MKPMLQFLNR TKSFLFVDVY
201: PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV
301: GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP
401: IQRGGPCQKP DLTVLHASYA FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT4]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.