Factsheet for Bra028988.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 7
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36734	Canola	extracellular, vacuole	77.39	96.74
Bra035561.1-P	Field mustard	extracellular, vacuole	70.26	87.83
Bra002927.1-P	Field mustard	extracellular, vacuole	70.43	87.47
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	68.35	84.52
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	60.7	70.79
KRH14333	Soybean	endoplasmic reticulum, extracellular	56.35	70.28
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	56.17	68.58
KRH73795	Soybean	extracellular, vacuole	55.83	68.01
PGSC0003DMT400033482	Potato	extracellular, vacuole	53.39	64.77
Solyc12g014420.1.1	Tomato	extracellular	52.87	63.33
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	44.17	62.1
Bra015166.1-P	Field mustard	extracellular, vacuole	50.96	61.95
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	44.87	61.28
PGSC0003DMT400033484	Potato	extracellular, vacuole	41.74	60.15
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	46.78	57.85
TraesCS6B01G355600.1	Wheat	vacuole	47.13	56.69
TraesCS6D01G305000.1	Wheat	extracellular	46.96	56.37
Os02t0771700-01	Rice	extracellular	47.83	56.35
EES07606	Sorghum	extracellular, vacuole	46.96	54.99
Zm00001d018214_P001	Maize	extracellular	45.91	54.1
Bra032357.1-P	Field mustard	extracellular, vacuole	29.04	44.18
HORVU6Hr1G079630.2	Barley	mitochondrion, plastid, vacuole	40.17	42.7
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	35.13	42.0
Bra010800.1-P	Field mustard	vacuole	27.65	41.62
EER99488	Sorghum	extracellular, vacuole	36.0	41.4
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	35.3	41.18
Bra000508.1-P	Field mustard	extracellular, vacuole	26.96	39.74
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	27.3	39.15
Zm00001d021690_P001	Maize	extracellular	39.65	39.04
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	30.43	38.98
TraesCS1B01G454500.1	Wheat	vacuole	37.57	38.5
TraesCS7B01G285700.2	Wheat	extracellular	37.39	38.46
Bra021137.1-P	Field mustard	plasma membrane	25.74	38.34
Os07t0538000-01	Rice	extracellular	37.04	38.17
Bra029639.1-P	Field mustard	vacuole	30.43	38.04
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	36.87	37.86
Bra013297.1-P	Field mustard	vacuole	26.26	37.66
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	36.87	37.66
Bra012604.1-P	Field mustard	vacuole	25.91	37.53
TraesCS1B01G453900.1	Wheat	vacuole	37.22	37.48
Os08t0244500-00	Rice	extracellular	36.7	37.48
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	36.35	37.46
Bra023293.1-P	Field mustard	extracellular	26.96	37.44
Bra003212.1-P	Field mustard	extracellular	29.22	37.42
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	35.83	37.39
TraesCS1A01G422500.1	Wheat	vacuole	37.04	37.37
HORVU1Hr1G092310.2	Barley	extracellular	36.7	37.35
HORVU7Hr1G091100.3	Barley	vacuole	36.87	37.32
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	36.35	37.25
Os07t0539100-01	Rice	extracellular	35.83	37.25
Bra026644.1-P	Field mustard	extracellular	32.17	37.22
TraesCS1D01G431300.1	Wheat	vacuole	37.04	37.11
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	35.48	37.09
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	24.35	37.04
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	35.48	37.02
Bra012015.1-P	Field mustard	plasma membrane, vacuole	26.78	36.93
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	35.83	36.92
KXG36404	Sorghum	vacuole	36.35	36.86
Bra014747.1-P	Field mustard	extracellular	28.87	36.81
EER99489	Sorghum	extracellular, vacuole	37.04	36.66
Bra007161.1-P	Field mustard	extracellular	28.87	36.64
HORVU2Hr1G044460.2	Barley	vacuole	35.3	36.64
Os07t0539300-01	Rice	extracellular	36.7	36.57
Os07t0539400-00	Rice	extracellular, plastid, vacuole	32.87	36.28
Bra039852.1-P	Field mustard	vacuole	29.39	36.27
Bra028526.1-P	Field mustard	extracellular, vacuole	26.96	36.05
Bra005028.1-P	Field mustard	extracellular	27.83	35.71
Bra010330.1-P	Field mustard	cytosol	32.35	35.56
Bra007162.1-P	Field mustard	extracellular	27.83	35.56
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	36.17	35.43
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	29.91	34.96
Bra039757.1-P	Field mustard	extracellular, vacuole	30.61	34.85
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.61	34.78
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.09	34.46
Bra033641.1-P	Field mustard	extracellular, vacuole	25.74	34.26
EER99491	Sorghum	extracellular, vacuole	39.13	34.04
Zm00001d021695_P001	Maize	extracellular	38.09	33.85
Bra001918.1-P	Field mustard	extracellular, vacuole	28.17	33.75
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	29.39	33.73
Bra014979.1-P	Field mustard	extracellular, vacuole	27.48	33.05
Bra028343.1-P	Field mustard	extracellular, vacuole	27.3	32.98
Zm00001d006538_P001	Maize	vacuole	37.22	32.97
Bra016812.1-P	Field mustard	extracellular	29.74	32.95
Os07t0539900-01	Rice	extracellular	34.26	32.72
Zm00001d021697_P001	Maize	extracellular	38.78	32.09
Bra017659.1-P	Field mustard	vacuole	30.09	31.23
Bra037057.1-P	Field mustard	extracellular, vacuole	25.57	30.69
Bra032758.1-P	Field mustard	vacuole	25.57	30.62
Bra001245.1-P	Field mustard	vacuole	30.09	30.57
Bra038969.1-P	Field mustard	extracellular, vacuole	24.0	27.33
Bra027207.1-P	Field mustard	plastid	21.57	23.48

Protein Annotations

KEGG:00500+3.2.1.39	MapMan:11.10.2.2.1	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra028988	EnsemblPlants:Bra028988.1	EnsemblPlants:Bra028988.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4EJM2	PFAM:PF00332
PFAM:PF04885	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF102	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	InterPro:Stig1	TMHMM:TMhelix	UniParc:UPI000253FE7E	InterPro:X8
SEG:seg	:	:	:	:	:

Description

AT5G55180 (E=5e-216) | glycosyl hydrolase family 17 protein

Coordinates

chrA03:-:5733561..5742729

Molecular Weight (calculated)

62053.6 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.326

Length

575 amino acids

Sequence
(BLAST)

001: MAQLMKLLVT IALTFAITTA IITTRTTRTN PKTETFAVKD LRSPGTVKIK PGRFLAQKDE GGQGPKARNP SATNRCNKDS EICRSTEANP RMACCNNKCM
101: DLLTDKKNCG ACNKKCKYTE TCCGGQCANL NYNKRHCDSG MIGVNYGRIA DNLPAPEKVV ELLKSQGINR VKLFDTDKTV LTALANSGIK VVVSLPNENL
201: TAAAADQSYT DKWVQENVKK YTPATDIEAI AVGNEVFVDP KNTTKYLVAA MTNVQSSLVK FNLDKSVKIS SPIALSALAN SYPPSAGSFK PDLIEPVIKP
301: MLDLLRKTSS HLMVNAYPFF AYAANADKIP LDYALFRENA GNVDSGNGLK YNSLFDAQID AVYAAMAAVG FNDVKLVVTE TGWPSAGDEN EIGAGSANAA
401: AYNGGLVKRV LTGNGTPLKP NEPLNVYLFA LFNENQKTGP TSERNYGLFY PNENKVYDVP FSATVTPVSD SKVKVPVNTP SHVGQTWCVA NGKTTREKLQ
501: EALDYACGEG GADCRSIQKG ATCYDPESLE AHASYAFNSY YQKNARGVGT CNFGGAAYVV SQPPKYGKCE FPTGH

Best Arabidopsis Sequence Match ( AT5G55180.1 )
(BLAST)

001: MAVFVLSLLI LSSFSAIPFT YADSGMIGVN YGRIADNLPA PEKVVELLKT QGINRIKLYD TETTVLTALA NSGIKVVVSL PNENLASAAA DQSYTDTWVQ
101: DNIKKYIPAT DIEAIAVGNE VFVDPRNTTT YLVPAMKNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPELIE PVIKPMLDLL RKTSSHLMVN
201: AYPFFAYAAN ADKISLDYAL FKENAGNVDS GNGLKYNSLL DAQIDAVFAA MSAVGFNDVK LVVTETGWPS AGDENEIGAG SANAAAYNGG LVKRVLTGNG
301: TPLKPKEPLN VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVSLNGKS TPVNDNKEKV VPVKPSLVGQ TWCVANGKTT KEKLQEGLDY ACGEGGADCR
401: PIQPGATCYN PESLEAHASY AFNSYYQKNA RGVGTCNFGG AAYVVSQPPK YGKCEFPTGH

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4K3D8]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.