Factsheet for Bra000536.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83243	Canola	vacuole	98.94	98.94
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	89.15	86.86
Solyc07g008150.2.1	Tomato	extracellular, vacuole	69.58	67.44
PGSC0003DMT400079432	Potato	extracellular, vacuole	69.31	67.18
KRH20124	Soybean	golgi, vacuole	68.52	66.75
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	66.14	63.45
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	68.52	61.96
GSMUA_AchrUn_...	Banana	cytosol	47.35	60.27
Bra021137.1-P	Field mustard	plasma membrane	57.41	56.22
EER88625	Sorghum	extracellular, plasma membrane, vacuole	57.14	55.1
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	48.41	54.63
Zm00001d046534_P001	Maize	plasma membrane	55.82	53.55
TraesCS7A01G378100.1	Wheat	golgi, vacuole	56.08	53.13
TraesCS7B01G279900.1	Wheat	golgi, vacuole	55.29	52.38
HORVU0Hr1G021950.4	Barley	golgi, vacuole	55.03	52.0
TraesCS7D01G374900.1	Wheat	plastid, vacuole	55.56	47.51
Os06t0607000-01	Rice	plasma membrane	58.73	46.06
Bra023293.1-P	Field mustard	extracellular	43.65	39.86
Bra000508.1-P	Field mustard	extracellular, vacuole	41.01	39.74
Bra032357.1-P	Field mustard	extracellular, vacuole	38.36	38.36
Bra010800.1-P	Field mustard	vacuole	38.62	38.22
Bra012015.1-P	Field mustard	plasma membrane, vacuole	40.48	36.69
Bra013297.1-P	Field mustard	vacuole	37.83	35.66
Bra028526.1-P	Field mustard	extracellular, vacuole	40.21	35.35
Bra012604.1-P	Field mustard	vacuole	36.77	35.01
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	45.77	33.72
Bra027207.1-P	Field mustard	plastid	46.56	33.33
Bra033641.1-P	Field mustard	extracellular, vacuole	37.57	32.87
Bra035561.1-P	Field mustard	extracellular, vacuole	38.89	31.96
Bra002927.1-P	Field mustard	extracellular, vacuole	38.89	31.75
Bra015166.1-P	Field mustard	extracellular, vacuole	38.89	31.08
Bra039852.1-P	Field mustard	vacuole	37.83	30.69
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	39.15	30.02
Bra005028.1-P	Field mustard	extracellular	35.19	29.69
Bra003212.1-P	Field mustard	extracellular	34.13	28.73
Bra007162.1-P	Field mustard	extracellular	34.13	28.67
Bra007161.1-P	Field mustard	extracellular	33.86	28.26
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.57	28.06
Bra014747.1-P	Field mustard	extracellular	33.33	27.94
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	33.07	27.84
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	35.98	27.64
Bra029639.1-P	Field mustard	vacuole	33.33	27.39
Bra026644.1-P	Field mustard	extracellular	35.71	27.16
Bra010330.1-P	Field mustard	cytosol	36.77	26.58
Bra014979.1-P	Field mustard	extracellular, vacuole	33.33	26.36
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.92	26.35
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.13	25.7
Bra028343.1-P	Field mustard	extracellular, vacuole	32.28	25.63
Bra001918.1-P	Field mustard	extracellular, vacuole	32.28	25.42
Bra017659.1-P	Field mustard	vacuole	36.51	24.91
Bra039757.1-P	Field mustard	extracellular, vacuole	33.07	24.75
Bra037057.1-P	Field mustard	extracellular, vacuole	30.95	24.43
Bra028988.1-P	Field mustard	extracellular, vacuole	37.04	24.35
Bra016812.1-P	Field mustard	extracellular	33.07	24.08
Bra032758.1-P	Field mustard	vacuole	30.42	23.96
Bra038969.1-P	Field mustard	extracellular, vacuole	30.69	22.97
Bra001245.1-P	Field mustard	vacuole	33.86	22.61

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra000536	EnsemblPlants:Bra000536.1	EnsemblPlants:Bra000536.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4C8K8	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF47	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025400A1	SEG:seg

Description

AT2G26600 (E=3e-180) | glycosyl hydrolase family 17 protein

Coordinates

chrA03:-:11625596..11626894

Molecular Weight (calculated)

41790.3 Da

IEP (calculated)

8.636

GRAVY (calculated)

-0.046

Length

378 amino acids

Sequence
(BLAST)

001: MRSSRLLLLN FLFFFFSPIL TAKGAFVGTY GINYGRIADN IPSPDKVVLL LKQAKIRNVR IYDADHTVLQ AFSGTGLDLV VGLPNGFLKE MSSNADHALT
101: WVKDNVHSFL PTTRIRGIAI GNEVLGGGDS ELSGALLGAA KNVYNALKKM NLEETVQITT AHSQAVFADS YPPSSCVFKD NVVQFMKPLL EFFDQIGSPF
201: CLNAYPFLAY TYNPTQIDIN YALFKPTEGI YDPKTNLRYD NMLDAQIDAA YMALEDAGFK EMEVMITETG WASKGDSDEP AATPENARTY NYNLRKRLAK
301: KKGTPLRPKK VLKAYIFALF NENSKPGKSS ETHFGLYKPD GTISYDIGFN SLKSFSSSKV ASCYVALVIS ISVLLVMI

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.