Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- vacuole 4
- plasma membrane 5
- extracellular 3
- endoplasmic reticulum 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G153900.1 | Wheat | plasma membrane | 94.56 | 94.37 |
| TraesCS5A01G155600.1 | Wheat | plasma membrane | 94.56 | 94.37 |
| TraesCS5D01G160700.1 | Wheat | plasma membrane | 94.96 | 90.06 |
| HORVU2Hr1G036980.5 | Barley | plasma membrane | 84.68 | 85.37 |
| Os07t0577300-01 | Rice | extracellular | 80.65 | 80.32 |
| OQU90151 | Sorghum | vacuole | 79.84 | 80.16 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 78.23 | 78.86 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 77.22 | 76.6 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 51.61 | 64.32 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 64.72 | 61.85 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 63.71 | 60.31 |
| KRH58918 | Soybean | endoplasmic reticulum | 54.03 | 54.03 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 53.83 | 53.83 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 50.2 | 52.64 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 52.62 | 52.1 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 52.22 | 52.01 |
| PGSC0003DMT400081837 | Potato | extracellular | 50.6 | 50.4 |
| AT3G13560.4 | Thale cress | plasma membrane | 51.21 | 50.3 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 48.39 | 47.9 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 38.31 | 46.57 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 39.31 | 46.32 |
| HORVU4Hr1G067180.3 | Barley | extracellular, vacuole | 41.33 | 40.67 |
| HORVU3Hr1G070400.1 | Barley | extracellular, vacuole | 35.69 | 38.65 |
| HORVU3Hr1G070440.12 | Barley | plastid | 36.09 | 34.42 |
| HORVU2Hr1G102010.1 | Barley | golgi, mitochondrion, vacuole | 23.59 | 33.24 |
| HORVU5Hr1G084900.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 31.65 | 32.64 |
| HORVU3Hr1G084170.1 | Barley | extracellular, vacuole | 25.81 | 31.14 |
| HORVU4Hr1G027740.1 | Barley | vacuole | 30.04 | 29.86 |
| HORVU0Hr1G021950.4 | Barley | golgi, vacuole | 23.59 | 29.25 |
| HORVU5Hr1G075510.2 | Barley | plasma membrane, vacuole | 28.43 | 28.89 |
| HORVU7Hr1G091100.3 | Barley | vacuole | 33.06 | 28.87 |
| HORVU4Hr1G008950.1 | Barley | vacuole | 23.99 | 28.54 |
| HORVU1Hr1G010910.2 | Barley | extracellular, vacuole | 23.59 | 28.4 |
| HORVU2Hr1G044450.4 | Barley | extracellular, vacuole | 31.45 | 27.81 |
| HORVU7Hr1G079650.7 | Barley | extracellular, vacuole | 24.6 | 27.79 |
| HORVU4Hr1G063240.7 | Barley | golgi, vacuole | 24.19 | 27.71 |
| HORVU2Hr1G044460.2 | Barley | vacuole | 30.85 | 27.62 |
| HORVU1Hr1G011210.1 | Barley | vacuole | 23.59 | 27.21 |
| HORVU4Hr1G065340.1 | Barley | extracellular, vacuole | 23.39 | 26.91 |
| HORVU4Hr1G003090.3 | Barley | extracellular, vacuole | 29.03 | 26.87 |
| HORVU7Hr1G012550.1 | Barley | vacuole | 23.79 | 26.4 |
| HORVU1Hr1G073820.3 | Barley | mitochondrion, peroxisome, plastid, vacuole | 23.79 | 25.93 |
| HORVU6Hr1G079630.2 | Barley | mitochondrion, plastid, vacuole | 28.23 | 25.88 |
| HORVU3Hr1G067280.5 | Barley | plasma membrane | 22.18 | 25.82 |
| HORVU6Hr1G032490.1 | Barley | plastid | 22.78 | 25.34 |
| HORVU1Hr1G092310.2 | Barley | extracellular | 28.83 | 25.31 |
| HORVU1Hr1G092240.3 | Barley | extracellular, vacuole | 29.84 | 25.21 |
| HORVU5Hr1G083710.1 | Barley | golgi, mitochondrion, vacuole | 23.99 | 23.66 |
| HORVU5Hr1G095380.1 | Barley | cytosol | 14.11 | 22.29 |
| HORVU2Hr1G072890.1 | Barley | mitochondrion | 21.77 | 20.22 |
| HORVU2Hr1G047410.3 | Barley | vacuole | 22.38 | 18.41 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EMBL:AK358738 | UniProt:F2D4C9 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU5Hr1G048630 |
| EnsemblPlants:HORVU5Hr1G048630.2 | PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | SMART:SM00768 |
| SUPFAM:SSF51445 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0002005B5B | InterPro:X8 | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D4C9]
Coordinates
chrchr5H:-:376689549..376694051
Molecular Weight (calculated)
53437.3 Da
IEP (calculated)
6.165
GRAVY (calculated)
0.024
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGRNNMSPN RLEAVLMLLM FMVYNTSGAF VGINIGTRVS DLTSPSDIVS ILKAKKIQHV RLVDSNHEML VALANTGIEV MVGVPNNHLL RVGQSRSTAA
101: DWINKNVAAY IPATNITYIA VGDEILTTVP NAALVLVPAL QFLQSALLAA NLNTQVKISS PHSMDMISKA FPPSTATFNS TWNLTMSQYL EFLRTTGSSF
201: MLNAQPYYGY VKGQGVFPLQ YALFRSLNPN SQIADPNTNL FYTNMFDAMV DATYNSMKAM NFTNIPVMVT ASGWPWHSAR NEPAADVDNA LAYNTNLIRH
301: VLNNSGTPSQ PNNQVSTYLF ELFNEDLRSG SVSGESWGIM FSNASAVYSL AFEDVATTST DSPALHGMFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ
401: PGQPCYKPDD IVAVASYAFN DYYHRTQASG GTCNFNSTAT ISSTDPSHGS CKFAGSTGAN GSTASGPVSQ DSSASQSQSF WLTWLIAMLL PVLLLM
101: DWINKNVAAY IPATNITYIA VGDEILTTVP NAALVLVPAL QFLQSALLAA NLNTQVKISS PHSMDMISKA FPPSTATFNS TWNLTMSQYL EFLRTTGSSF
201: MLNAQPYYGY VKGQGVFPLQ YALFRSLNPN SQIADPNTNL FYTNMFDAMV DATYNSMKAM NFTNIPVMVT ASGWPWHSAR NEPAADVDNA LAYNTNLIRH
301: VLNNSGTPSQ PNNQVSTYLF ELFNEDLRSG SVSGESWGIM FSNASAVYSL AFEDVATTST DSPALHGMFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ
401: PGQPCYKPDD IVAVASYAFN DYYHRTQASG GTCNFNSTAT ISSTDPSHGS CKFAGSTGAN GSTASGPVSQ DSSASQSQSF WLTWLIAMLL PVLLLM
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.