Factsheet for HORVU2Hr1G072890.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	70.22	96.15
TraesCS2A01G294700.1	Wheat	plasma membrane	69.85	95.64
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	69.66	95.14
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	60.3	79.12
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	57.68	77.97
EES10741	Sorghum	golgi, plasma membrane, vacuole	59.36	77.32
HORVU3Hr1G067280.5	Barley	plasma membrane	54.49	68.31
KRH22675	Soybean	vacuole	45.51	61.99
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	43.07	60.05
Solyc11g068440.1.1	Tomato	extracellular	42.51	59.74
KRH25239	Soybean	extracellular, plasma membrane, vacuole	43.07	58.67
GSMUA_Achr6P13230_001	Banana	vacuole	36.7	58.33
CDY04498	Canola	extracellular, vacuole	41.57	57.51
KRH30421	Soybean	extracellular, plasma membrane, vacuole	41.76	56.74
KRH26646	Soybean	extracellular, plasma membrane, vacuole	45.32	56.67
AT2G27500.1	Thale cress	vacuole	41.39	56.38
CDX83270	Canola	extracellular, vacuole	41.01	56.15
Bra000508.1-P	Field mustard	extracellular, vacuole	40.82	55.9
CDY31181	Canola	extracellular, vacuole	40.82	55.9
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	41.95	54.63
HORVU3Hr1G084170.1	Barley	extracellular, vacuole	41.76	54.26
Bra012015.1-P	Field mustard	plasma membrane, vacuole	41.2	52.76
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	41.95	49.23
CDX71449	Canola	plasma membrane, vacuole	41.2	48.46
GSMUA_Achr10P...	Banana	mitochondrion	31.27	44.65
HORVU7Hr1G012550.1	Barley	vacuole	35.39	42.28
HORVU1Hr1G010910.2	Barley	extracellular, vacuole	32.58	42.23
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	33.9	41.23
HORVU4Hr1G063240.7	Barley	golgi, vacuole	33.33	41.11
HORVU1Hr1G011210.1	Barley	vacuole	32.21	40.0
HORVU0Hr1G021950.4	Barley	golgi, vacuole	28.09	37.5
HORVU4Hr1G008950.1	Barley	vacuole	28.65	36.69
HORVU6Hr1G032490.1	Barley	plastid	29.59	35.43
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	26.59	32.95
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	26.59	31.0
HORVU6Hr1G079630.2	Barley	mitochondrion, plastid, vacuole	30.71	30.31
HORVU4Hr1G027740.1	Barley	vacuole	28.28	30.26
HORVU2Hr1G102010.1	Barley	golgi, mitochondrion, vacuole	19.48	29.55
HORVU3Hr1G070440.12	Barley	plastid	28.28	29.04
HORVU5Hr1G075510.2	Barley	plasma membrane, vacuole	26.03	28.48
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	25.66	28.48
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	28.46	28.36
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	26.59	28.23
HORVU5Hr1G095380.1	Barley	cytosol	15.73	26.75
HORVU7Hr1G091100.3	Barley	vacuole	27.53	25.88
HORVU2Hr1G044460.2	Barley	vacuole	26.59	25.63
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	26.59	25.31
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	23.6	25.0
HORVU2Hr1G036980.5	Barley	plasma membrane	22.1	23.98
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	25.84	23.51
HORVU1Hr1G092310.2	Barley	extracellular	24.72	23.36
HORVU5Hr1G048630.2	Barley	plasma membrane, vacuole	20.22	21.77
HORVU2Hr1G047410.3	Barley	vacuole	10.49	9.29

Protein Annotations

EnsemblPlants:HORVU2Hr1G072890.1	EnsemblPlantsGene:HORVU2Hr1G072890	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF233	PFAM:PF00332	SEG:seg	SUPFAM:SSF51445
UniParc:UPI000B48679E	UniProt:A0A287IF65	MapMan:50.3.2	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:525245738..525250338

Molecular Weight (calculated)

58040.4 Da

IEP (calculated)

9.132

GRAVY (calculated)

-0.239

Length

534 amino acids

Sequence
(BLAST)

001: MEWSARRRCL QLQVDTRRRR TCTWTGRPTR ALVSVSSPSR RALPPSSRLP AYYKTPGKHT RRGLANGCNC RRSSPCPPLD KYPQTPPQAQ KNAGQPAAGT
101: LRPHNTRERA SERPKVKHSP GPGAWPELEL ETRQRPRSSG NPAMAVAEPS RTGSPPRFLL LVFVLLLTAT ADEAVAAGGL SIGINYGQIA DNLPSPSRVS
201: MLLRSMQVSK VKLYDADQNV LSAFLDTGVE FVIGIGNENV SAMVDPAAAR AWVQQHVRPY LPSTRITCIT VGNEVFKGND TALKDSLLPA MKSVYQALGA
301: LGLQGQVNVT TAHSLDIMGS SYPPSAGAFR PDVVPYIQPL LDFLSAARSP FLINCYPYFA YKDDPDGVPL EYVLFQPNAG VTDPATGLNY DNMLYAQVDS
401: VYAAVQALGH TDVDVKISET GWPSRGDPDE AGATPQYAGI YIGNLLRRIE MKQGTPLRPA VPIDVYVFAL FNENLKPGPA SERNYGLFYP DGTPVYNVGL
501: RGYLPPMDES DATRTAIQLF ALIALASVIT LVLS

Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)

001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.