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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010800.1-P Field mustard vacuole 93.33 98.95
CDY63842 Canola golgi, vacuole 66.67 93.75
CDX99881 Canola extracellular, vacuole 82.47 88.36
CDY26296 Canola extracellular, plasma membrane, vacuole 86.91 88.22
AT1G30080.1 Thale cress vacuole 88.4 87.75
VIT_10s0003g03690.t01 Wine grape extracellular 64.44 69.6
CDX78840 Canola vacuole 61.73 62.34
CDX99476 Canola vacuole 61.73 62.34
CDX90405 Canola vacuole 60.49 61.71
CDY01532 Canola vacuole 60.25 61.46
CDX76528 Canola extracellular, vacuole 60.0 61.36
CDY34065 Canola extracellular, vacuole 59.75 59.9
EER88444 Sorghum extracellular, vacuole 53.33 52.94
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 53.09 52.83
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 52.35 52.35
TraesCS7B01G233500.1 Wheat extracellular 52.35 52.35
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 52.35 52.35
HORVU7Hr1G079650.7 Barley extracellular, vacuole 50.86 46.92
CDY04498 Canola extracellular, vacuole 43.7 45.85
CDX83270 Canola extracellular, vacuole 41.98 43.59
CDY31181 Canola extracellular, vacuole 41.73 43.33
CDX93815 Canola extracellular 43.21 42.27
Os06t0531000-00 Rice vacuole 51.6 42.14
CDY69080 Canola extracellular 43.21 41.87
CDY13362 Canola extracellular, vacuole 41.73 40.82
CDY21869 Canola plasma membrane 39.01 40.41
CDY20153 Canola plasma membrane 39.01 40.41
CDX67530 Canola extracellular 42.22 40.05
CDY38531 Canola golgi, vacuole 36.54 38.74
CDX83243 Canola vacuole 35.8 38.36
CDX71449 Canola plasma membrane, vacuole 42.72 38.11
CDY56498 Canola extracellular, vacuole 40.49 37.1
CDY18049 Canola extracellular, vacuole 40.0 36.65
CDX92794 Canola endoplasmic reticulum, extracellular 40.74 36.59
CDY20780 Canola extracellular, vacuole 40.0 36.08
CDY46679 Canola extracellular, vacuole 39.51 35.87
CDY06601 Canola endoplasmic reticulum, extracellular 39.75 35.86
CDY17308 Canola extracellular, vacuole 39.51 35.63
CDY22386 Canola extracellular, vacuole 37.53 35.19
CDX71547 Canola extracellular, vacuole 37.78 35.09
CDY19908 Canola extracellular, vacuole 39.75 35.08
CDY36734 Canola extracellular, vacuole 39.75 35.0
CDY12009 Canola extracellular, vacuole 39.75 35.0
CDY30112 Canola cytosol 36.05 34.52
CDX87130 Canola vacuole 39.01 33.98
CDY19838 Canola extracellular, vacuole 38.02 32.98
CDY40219 Canola extracellular 35.31 31.78
CDY20461 Canola extracellular 35.06 31.56
CDX69064 Canola extracellular, plasma membrane, vacuole 39.01 31.29
CDX76097 Canola extracellular 34.81 31.26
CDY41232 Canola extracellular 34.81 31.26
CDY53600 Canola extracellular 34.57 31.11
CDX75437 Canola extracellular, plasma membrane, vacuole 38.77 31.03
CDY02936 Canola extracellular 34.57 30.97
CDY41234 Canola extracellular 34.57 30.77
CDY62387 Canola extracellular 34.07 30.73
CDY53692 Canola extracellular 34.07 30.73
CDY40218 Canola extracellular 34.32 30.68
CDY26761 Canola vacuole 37.78 29.88
CDY37244 Canola vacuole 37.78 29.88
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 37.28 29.43
CDY64970 Canola extracellular, plasma membrane, vacuole 36.05 29.03
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.05 29.03
CDY24629 Canola vacuole 32.84 28.91
CDY28063 Canola vacuole 32.59 28.7
CDY08004 Canola vacuole 32.59 28.7
CDY59775 Canola extracellular, vacuole 33.09 28.27
CDY48807 Canola extracellular 34.57 28.17
CDY62033 Canola extracellular, plasma membrane, vacuole 37.04 28.14
CDY45466 Canola vacuole 31.85 28.04
CDY09427 Canola extracellular 34.32 27.97
CDY63754 Canola extracellular, vacuole 32.84 27.82
CDY50110 Canola extracellular, vacuole 32.59 27.73
CDY18092 Canola extracellular, vacuole 32.59 27.73
CDY53213 Canola extracellular, vacuole 32.84 27.71
CDY01191 Canola extracellular, vacuole 32.59 27.5
CDY12732 Canola extracellular, vacuole 32.59 27.5
CDY06469 Canola extracellular 31.6 26.72
CDY06818 Canola extracellular, plasma membrane, vacuole 33.09 26.69
CDX97707 Canola plastid 36.05 26.59
CDY08310 Canola extracellular, vacuole 31.36 26.51
CDY12371 Canola extracellular, vacuole 31.36 26.51
CDY16440 Canola extracellular 32.84 26.39
CDY27122 Canola extracellular, vacuole 31.11 26.3
CDY58676 Canola extracellular, vacuole 32.35 25.99
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 26.67 25.47
CDY21013 Canola extracellular 31.85 24.86
CDY31214 Canola vacuole 31.6 24.52
CDY59252 Canola extracellular, plasma membrane, vacuole 24.69 24.51
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 24.94 23.99
CDY67322 Canola extracellular 13.09 23.98
CDX74052 Canola vacuole 32.1 22.93
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078DM12EnsemblPlants:CDX90225ProteinID:CDX90225
ProteinID:CDX90225.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00150787001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF85SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF0E97
SEG:seg:::::
Description
BnaA08g17590D
Coordinates
chrLK031862:-:739855..741687
Molecular Weight (calculated)
44969.2 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.029
Length
405 amino acids
Sequence
(BLAST)
001: MSKMFSRIAM TNYVVVLLLS LTSLEHGLLF QRVSSLGINY GQVGDNLPPP DKVIQLLGSL HINKTRIYDT NPKVLSSFAN SNIELFVTVE NQMLPSLVDP
101: QQALQWVTSR IKPFFPATKI GGIAVGNELY TDDDSSLIGY LVPAMTSIHA ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPQVTGV MTQLLSFLHS
201: TKSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYHYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNLL
301: KRQLQSEGTP LRKNMGLDVY LFALFNEDLK PGPTSERNYG LYQPDETMAY NVGLLSSSQS STSSTNSIVS LTSSASTDIT RGMQRLIYFM CIYLLAIHML
401: IRRRY
Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.