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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99881 Canola extracellular, vacuole 91.48 96.56
CDX90225 Canola vacuole 88.22 86.91
AT1G30080.1 Thale cress vacuole 88.72 86.76
CDY63842 Canola golgi, vacuole 60.4 83.68
VIT_10s0003g03690.t01 Wine grape extracellular 65.16 69.33
CDY01532 Canola vacuole 60.65 60.96
CDX90405 Canola vacuole 60.65 60.96
CDX99476 Canola vacuole 61.15 60.85
CDX78840 Canola vacuole 61.15 60.85
CDX76528 Canola extracellular, vacuole 60.15 60.61
CDY34065 Canola extracellular, vacuole 59.9 59.16
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 54.89 53.81
EER88444 Sorghum extracellular, vacuole 54.64 53.43
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 53.88 53.09
TraesCS7B01G233500.1 Wheat extracellular 53.38 52.59
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 53.38 52.59
HORVU7Hr1G079650.7 Barley extracellular, vacuole 52.38 47.61
CDY04498 Canola extracellular, vacuole 44.61 46.11
CDX83270 Canola extracellular, vacuole 43.86 44.87
CDY31181 Canola extracellular, vacuole 43.61 44.62
Os06t0531000-00 Rice vacuole 53.13 42.74
CDX93815 Canola extracellular 44.11 42.51
CDY69080 Canola extracellular 44.36 42.34
CDY13362 Canola extracellular, vacuole 42.61 41.06
CDX67530 Canola extracellular 43.36 40.52
CDY21869 Canola plasma membrane 38.85 39.64
CDY20153 Canola plasma membrane 38.85 39.64
CDX71449 Canola plasma membrane, vacuole 44.11 38.77
CDY38531 Canola golgi, vacuole 36.84 38.48
CDX83243 Canola vacuole 36.34 38.36
CDX92794 Canola endoplasmic reticulum, extracellular 43.11 38.14
CDY20780 Canola extracellular, vacuole 42.86 38.08
CDY06601 Canola endoplasmic reticulum, extracellular 42.61 37.86
CDY17308 Canola extracellular, vacuole 42.61 37.86
CDY18049 Canola extracellular, vacuole 41.85 37.78
CDY56498 Canola extracellular, vacuole 41.85 37.78
CDY46679 Canola extracellular, vacuole 42.11 37.67
CDY36734 Canola extracellular, vacuole 42.86 37.17
CDY19908 Canola extracellular, vacuole 42.61 37.04
CDY12009 Canola extracellular, vacuole 42.61 36.96
CDY22386 Canola extracellular, vacuole 39.6 36.57
CDX71547 Canola extracellular, vacuole 39.35 36.01
CDX87130 Canola vacuole 40.1 34.41
CDY19838 Canola extracellular, vacuole 39.1 33.4
CDY30112 Canola cytosol 35.34 33.33
CDY20461 Canola extracellular 35.84 31.78
CDX76097 Canola extracellular 35.34 31.26
CDY40219 Canola extracellular 35.09 31.11
CDY53600 Canola extracellular 35.09 31.11
CDY02936 Canola extracellular 34.84 30.75
CDY41232 Canola extracellular 34.59 30.6
CDX69064 Canola extracellular, plasma membrane, vacuole 38.6 30.5
CDY53692 Canola extracellular 34.09 30.29
CDY62387 Canola extracellular 34.09 30.29
CDX75437 Canola extracellular, plasma membrane, vacuole 38.35 30.24
CDY41234 Canola extracellular 34.34 30.11
CDY40218 Canola extracellular 34.09 30.02
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 38.6 30.02
CDY24629 Canola vacuole 34.34 29.78
CDY48807 Canola extracellular 36.84 29.58
CDY28063 Canola vacuole 34.09 29.57
CDY37244 Canola vacuole 37.84 29.49
CDY26761 Canola vacuole 37.84 29.49
CDY09427 Canola extracellular 36.59 29.38
CDY08004 Canola vacuole 33.83 29.35
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.84 29.22
CDY64970 Canola extracellular, plasma membrane, vacuole 36.84 29.22
CDY59775 Canola extracellular, vacuole 34.59 29.11
CDY45466 Canola vacuole 33.33 28.91
CDY62033 Canola extracellular, plasma membrane, vacuole 38.6 28.89
CDY01191 Canola extracellular, vacuole 34.59 28.75
CDY63754 Canola extracellular, vacuole 34.34 28.66
CDY12732 Canola extracellular, vacuole 34.34 28.54
CDY53213 Canola extracellular, vacuole 34.34 28.54
CDY18092 Canola extracellular, vacuole 33.58 28.15
CDY50110 Canola extracellular, vacuole 33.58 28.15
CDY06469 Canola extracellular 33.33 27.77
CDY06818 Canola extracellular, plasma membrane, vacuole 34.84 27.69
CDY12371 Canola extracellular, vacuole 33.08 27.56
CDY08310 Canola extracellular, vacuole 33.08 27.56
CDY27122 Canola extracellular, vacuole 32.83 27.35
CDY58676 Canola extracellular, vacuole 33.83 26.79
CDY16440 Canola extracellular 33.83 26.79
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 27.57 25.94
CDX97707 Canola plastid 35.34 25.68
CDY67322 Canola extracellular 14.04 25.34
CDY21013 Canola extracellular 32.58 25.05
CDY31214 Canola vacuole 32.58 24.9
CDY59252 Canola extracellular, plasma membrane, vacuole 24.56 24.02
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 24.81 23.52
CDX74052 Canola vacuole 33.33 23.46
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078GLS2UniProt:A0A078GLS2EnsemblPlants:CDY26296
ProteinID:CDY26296ProteinID:CDY26296.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00034985001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF85SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EF48A0
SEG:seg:::::
Description
BnaA09g26470DBnaA09g26470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLS2]
Coordinates
chrLK032187:+:292183..294201
Molecular Weight (calculated)
44311.0 Da
IEP (calculated)
5.685
GRAVY (calculated)
-0.046
Length
399 amino acids
Sequence
(BLAST)
001: MTNSFVLLLF FLTFLEHGLF FQRVSSLGIN YGQVGDNLPP PNKVLQLLSS LNINKTRIYD TNPQVLTSFA NSNIELFVTV ENEILPSLVD PQKALQWVTS
101: RIKPYFPATK IGGIAVGNEL YTDDDSSLIG YLVPAMTSIH AALVQTGLDK YIQVSTPSSL SLLQESYPPS AGCFRPQVAG VMMQLLSFLR STKSPFWINA
201: YPYFAYKDSP TKIPLDYVLF NPNPGMVDPY TKYHYDNMLY AQVDAVIFAM ARLGFKDIEV GVSETGWPSK GDGDEIGATV ANAAVYNKNL LKRQLHGEGT
301: PLRPNMSLDV YLFALFNEDL KPGPTSERNY GLYQPDETMT YNVGLLSSSS TSSQSSTSTN SFMSITSSAS TDIKEGNQRL IYLTCVYLVA IHMIIRRPY
Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.