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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, peroxisome
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011100.1-P Field mustard extracellular, plasma membrane, vacuole 99.29 83.86
CDY06818 Canola extracellular, plasma membrane, vacuole 95.99 81.08
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 87.5 72.32
CDY62033 Canola extracellular, plasma membrane, vacuole 90.57 72.05
AT4G29360.2 Thale cress vacuole 89.86 70.04
CDY64970 Canola extracellular, plasma membrane, vacuole 54.95 46.32
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 54.72 46.12
CDY67322 Canola extracellular 20.05 38.46
CDX92794 Canola endoplasmic reticulum, extracellular 35.38 33.26
CDY56498 Canola extracellular, vacuole 34.67 33.26
CDY20780 Canola extracellular, vacuole 34.43 32.52
CDY46679 Canola extracellular, vacuole 34.2 32.51
CDY48807 Canola extracellular 37.97 32.39
CDY18049 Canola extracellular, vacuole 33.73 32.35
CDY06601 Canola endoplasmic reticulum, extracellular 34.2 32.29
CDY09427 Canola extracellular 37.74 32.19
CDY63842 Canola golgi, vacuole 21.7 31.94
CDY16440 Canola extracellular 37.5 31.55
CDY36734 Canola extracellular, vacuole 34.2 31.52
CDY17308 Canola extracellular, vacuole 33.25 31.4
CDY12009 Canola extracellular, vacuole 33.96 31.3
CDY19908 Canola extracellular, vacuole 33.73 31.15
CDY58676 Canola extracellular, vacuole 36.79 30.95
CDX69064 Canola extracellular, plasma membrane, vacuole 36.32 30.5
CDX75437 Canola extracellular, plasma membrane, vacuole 35.85 30.04
CDY31214 Canola vacuole 35.61 28.93
CDY21013 Canola extracellular 35.38 28.9
CDX99881 Canola extracellular, vacuole 25.0 28.04
CDY26761 Canola vacuole 33.73 27.93
CDY37244 Canola vacuole 33.49 27.73
CDY50110 Canola extracellular, vacuole 31.13 27.73
CDY26296 Canola extracellular, plasma membrane, vacuole 25.94 27.57
CDY20461 Canola extracellular 29.25 27.56
CDY18092 Canola extracellular, vacuole 30.9 27.52
CDX76097 Canola extracellular 29.25 27.49
CDY02936 Canola extracellular 29.25 27.43
CDY59775 Canola extracellular, vacuole 30.66 27.43
CDY53692 Canola extracellular 29.01 27.39
CDY40218 Canola extracellular 29.25 27.37
CDX87130 Canola vacuole 29.95 27.31
CDY53213 Canola extracellular, vacuole 30.9 27.29
CDY63754 Canola extracellular, vacuole 30.66 27.2
CDY08004 Canola vacuole 29.48 27.17
CDY62387 Canola extracellular 28.77 27.17
CDY19838 Canola extracellular, vacuole 29.72 26.98
CDY04498 Canola extracellular, vacuole 24.53 26.94
CDY08310 Canola extracellular, vacuole 30.42 26.93
CDX83270 Canola extracellular, vacuole 24.76 26.92
CDY53600 Canola extracellular 28.3 26.67
CDX90225 Canola vacuole 25.47 26.67
CDY31181 Canola extracellular, vacuole 24.53 26.67
CDY41234 Canola extracellular 28.54 26.59
CDX93815 Canola extracellular 25.94 26.57
CDY69080 Canola extracellular 26.18 26.55
CDY06469 Canola extracellular 29.95 26.51
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 26.18 26.37
CDY13362 Canola extracellular, vacuole 25.71 26.33
CDY40219 Canola extracellular 27.83 26.22
CDY27122 Canola extracellular, vacuole 29.48 26.1
CDY59252 Canola extracellular, plasma membrane, vacuole 25.0 25.98
CDY41232 Canola extracellular 27.59 25.94
CDX83243 Canola vacuole 23.11 25.93
CDY22386 Canola extracellular, vacuole 26.42 25.93
CDY38531 Canola golgi, vacuole 23.35 25.92
CDY24629 Canola vacuole 28.07 25.87
CDY21869 Canola plasma membrane 23.82 25.83
CDX71547 Canola extracellular, vacuole 26.42 25.69
CDY12371 Canola extracellular, vacuole 29.01 25.68
CDY28063 Canola vacuole 27.83 25.65
CDY12732 Canola extracellular, vacuole 29.01 25.62
CDY20153 Canola plasma membrane 23.58 25.58
CDX67530 Canola extracellular 25.71 25.53
CDX90405 Canola vacuole 23.82 25.44
CDY45466 Canola vacuole 27.59 25.43
CDY01191 Canola extracellular, vacuole 28.77 25.42
CDY01532 Canola vacuole 23.35 24.94
CDX99476 Canola vacuole 23.35 24.69
CDX78840 Canola vacuole 23.35 24.69
CDX76528 Canola extracellular, vacuole 22.88 24.49
CDY34065 Canola extracellular, vacuole 22.64 23.76
CDX71449 Canola plasma membrane, vacuole 25.24 23.57
CDY30112 Canola cytosol 22.64 22.7
CDX74052 Canola vacuole 28.54 21.34
CDX97707 Canola plastid 22.88 17.67
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078JT72UniProt:A0A078JT72EnsemblPlants:CDY68826
ProteinID:CDY68826ProteinID:CDY68826.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00080384001InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF88
SMART:SM00768SUPFAM:SSF51445UniParc:UPI0004EE2535InterPro:X8SEG:seg:
Description
BnaA01g34890DBnaA01g34890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT72]
Coordinates
chrLK038082:-:1675..3197
Molecular Weight (calculated)
45366.3 Da
IEP (calculated)
4.811
GRAVY (calculated)
-0.112
Length
424 amino acids
Sequence
(BLAST)
001: MIGVPNADLL AFAQFQSNVD TWLHNNILPY YPTTKITSIS VGLEVTEAPD NATGLLLPAM RNIHTALKKS GLDKKIKISS SHSLAVLSRS FPPSSATFSK
101: KHLAFLKPML EFLVENESPF MIDLYPYYAY RDSSEKLDAI YFALTAMNFK TVKVMVTESG WPSRGSPKET AATPDNALAY NTNLIRHVVG DPGTPAKPGE
201: EVDVYLFSLF NENRKPGIES ERNWGMFYAN GTSVYALDFT GESSVPVSPS NSSTTSPGPS SSPGNSTVII GGGGGARKWC VASSQASVTE LQTALDWACG
301: PGSVDCSAVQ PDQPCFEPDT VLSHASYAFN TYYQQSGANS SDCSFGGVSV EVDKDPSYGN CLYMIAPSTD GMNRTMAGNI TGNITAIDSP MASPSSSSDG
401: YRQMVVSVAA SVLLPLFVVS LSLW
Best Arabidopsis Sequence Match ( AT4G29360.1 )
(BLAST)
001: MGQRLNLVFW IFVSILAFLN FGMASKIGIC YGRNADNLPS PNRVSELIQH LNIKFVRIYD ANIDVLKAFA NTGIELMIGV PNADLLAFAQ FQSNVDTWLS
101: NNILPYYPST KITSISVGLE VTEAPDNATG LVLPAMRNIH TALKKSGLDK KIKISSSHSL AILSRSFPPS SASFSKKHSA FLKPMLEFLV ENESPFMIDL
201: YPYYAYRDST EKVPLEYALF ESSSQVVDPA TGLLYSNMFD AQLDAIYFAL TAMSFKTVKV MVTESGWPSK GSPKETAATP ENALAYNTNL IRHVIGDPGT
301: PAKPGEEIDV YLFSLFNENR KPGIESERNW GMFYANGTNV YALDFTGENT TPVSPTNSTT GTSPSPSSSP IINGNSTVTI GGGGGGGTKK WCIASSQASV
401: TELQTALDWA CGPGNVDCSA VQPDQPCFEP DTVLSHASYA FNTYYQQSGA SSIDCSFNGA SVEVDKDPSY GNCLYMIAPA TDGFNRTMAG NITGNITAID
501: SPLASPSSTN EAFRQMVVAV SVLLPCFVVC SSIW
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G29360]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.