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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53600 Canola extracellular 97.56 97.56
AT2G39640.1 Thale cress endoplasmic reticulum, extracellular, vacuole 74.44 61.02
CDX76097 Canola extracellular 57.56 57.43
CDY02936 Canola extracellular 57.56 57.3
CDY53692 Canola extracellular 56.44 56.57
CDY62387 Canola extracellular 56.22 56.35
CDY41234 Canola extracellular 56.89 56.26
CDY40218 Canola extracellular 56.44 56.07
CDY41232 Canola extracellular 55.78 55.65
CDY40219 Canola extracellular 55.56 55.56
KRH01668 Soybean extracellular 51.33 50.66
VIT_13s0019g01180.t01 Wine grape extracellular, vacuole 49.33 49.66
GSMUA_Achr6P05040_001 Banana extracellular, vacuole 42.44 44.42
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular, vacuole 44.67 43.51
GSMUA_Achr11P... Banana plasma membrane, vacuole 39.11 43.35
TraesCS4B01G142000.1 Wheat golgi 44.0 42.86
TraesCS4D01G136800.1 Wheat cytosol, extracellular, plastid, vacuole 42.67 42.76
TraesCS4A01G175900.1 Wheat extracellular 43.78 42.73
Solyc07g005330.2.1 Tomato extracellular 42.89 42.05
PGSC0003DMT400008245 Potato vacuole 42.0 40.91
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 41.56 40.04
HORVU4Hr1G027740.1 Barley vacuole 44.0 39.68
TraesCS5A01G329700.1 Wheat vacuole 34.44 39.44
Os11t0704600-01 Rice extracellular 41.33 39.41
TraesCS5D01G335600.1 Wheat vacuole 33.78 38.68
TraesCSU01G204400.1 Wheat extracellular, vacuole 33.78 38.68
TraesCSU01G239400.1 Wheat extracellular, vacuole 33.78 38.68
Zm00001d004768_P001 Maize extracellular 38.89 38.55
CDX87130 Canola vacuole 39.78 38.49
PGSC0003DMT400060499 Potato extracellular 42.89 38.29
CDY19838 Canola extracellular, vacuole 39.33 37.9
CDY18049 Canola extracellular, vacuole 37.11 37.78
Solyc05g054440.2.1 Tomato unclear 43.78 37.45
CDY56498 Canola extracellular, vacuole 36.67 37.33
CDX99881 Canola extracellular, vacuole 31.33 37.3
CDY46679 Canola extracellular, vacuole 35.78 36.1
CDX75437 Canola extracellular, plasma membrane, vacuole 40.44 35.97
CDX92794 Canola endoplasmic reticulum, extracellular 36.0 35.92
CDY06601 Canola endoplasmic reticulum, extracellular 35.78 35.86
CDY17308 Canola extracellular, vacuole 35.78 35.86
CDX69064 Canola extracellular, plasma membrane, vacuole 40.22 35.84
CDY26296 Canola extracellular, plasma membrane, vacuole 31.78 35.84
CDY20780 Canola extracellular, vacuole 35.56 35.63
CDY04498 Canola extracellular, vacuole 30.44 35.49
CDX83243 Canola vacuole 29.78 35.45
CDY36734 Canola extracellular, vacuole 36.22 35.43
CDY38531 Canola golgi, vacuole 30.0 35.34
CDY12009 Canola extracellular, vacuole 36.0 35.22
CDY31181 Canola extracellular, vacuole 30.44 35.13
CDX90225 Canola vacuole 31.56 35.06
CDY24629 Canola vacuole 35.78 35.0
CDY28063 Canola vacuole 35.78 35.0
CDY37244 Canola vacuole 39.78 34.96
CDX83270 Canola extracellular, vacuole 30.22 34.87
CDY26761 Canola vacuole 39.56 34.77
CDY19908 Canola extracellular, vacuole 35.33 34.64
Zm00001d019248_P001 Maize extracellular, vacuole 38.22 34.54
CDY63842 Canola golgi, vacuole 22.0 34.38
CDY08004 Canola vacuole 35.11 34.35
CDY45466 Canola vacuole 35.11 34.35
TraesCS5D01G335500.1 Wheat golgi, plasma membrane, vacuole 35.78 34.11
CDY20153 Canola plasma membrane 29.33 33.76
CDY21869 Canola plasma membrane 29.33 33.76
CDY69080 Canola extracellular 31.11 33.49
CDX93815 Canola extracellular 30.67 33.33
CDY13362 Canola extracellular, vacuole 30.44 33.09
CDX90405 Canola vacuole 29.11 33.0
CDY01532 Canola vacuole 29.11 33.0
CDX78840 Canola vacuole 29.33 32.92
CDX99476 Canola vacuole 29.33 32.92
KXG34744 Sorghum vacuole 36.89 32.81
TraesCS5A01G329600.1 Wheat extracellular, plasma membrane, vacuole 35.11 32.78
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 36.44 32.73
TraesCS5B01G329800.1 Wheat endoplasmic reticulum, golgi, mitochondrion, vacuole 35.33 32.45
HORVU5Hr1G083710.1 Barley golgi, mitochondrion, vacuole 36.0 32.21
CDX67530 Canola extracellular 30.44 32.08
CDX76528 Canola extracellular, vacuole 28.22 32.07
CDY53213 Canola extracellular, vacuole 34.0 31.88
CDY06469 Canola extracellular 33.78 31.73
CDY08310 Canola extracellular, vacuole 33.78 31.73
CDY59775 Canola extracellular, vacuole 33.33 31.65
CDY64970 Canola extracellular, plasma membrane, vacuole 35.33 31.61
CDY18092 Canola extracellular, vacuole 33.33 31.51
CDY22386 Canola extracellular, vacuole 30.22 31.48
CDY34065 Canola extracellular, vacuole 28.22 31.44
CDX71547 Canola extracellular, vacuole 30.44 31.42
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 35.11 31.41
CDY09427 Canola extracellular 34.67 31.39
CDY48807 Canola extracellular 34.67 31.39
CDY63754 Canola extracellular, vacuole 33.33 31.38
CDY50110 Canola extracellular, vacuole 33.11 31.3
CDY21013 Canola extracellular 35.78 31.02
CDY01191 Canola extracellular, vacuole 32.89 30.83
CDY12732 Canola extracellular, vacuole 32.67 30.62
CDY12371 Canola extracellular, vacuole 32.44 30.48
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 34.67 30.41
CDY27122 Canola extracellular, vacuole 32.22 30.27
CDY62033 Canola extracellular, plasma membrane, vacuole 35.78 30.21
CDY31214 Canola vacuole 34.89 30.08
CDX71449 Canola plasma membrane, vacuole 30.22 29.96
CDY06818 Canola extracellular, plasma membrane, vacuole 33.33 29.88
CDY16440 Canola extracellular 33.33 29.76
CDY58676 Canola extracellular, vacuole 33.11 29.56
CDY67322 Canola extracellular 14.44 29.41
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 27.56 29.25
CDY59252 Canola extracellular, plasma membrane, vacuole 25.78 28.43
CDY30112 Canola cytosol 26.67 28.37
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 25.78 27.55
CDX74052 Canola vacuole 34.67 27.51
CDX97707 Canola plastid 27.33 22.4
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:1.20.58.1040Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078G4V3UniProt:A0A078G4V3
EnsemblPlants:CDY20461ProteinID:CDY20461ProteinID:CDY20461.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00012549001InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF142SMART:SM00768
SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EAD0D1InterPro:X8::
Description
BnaC04g05830DBnaC04g05830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4V3]
Coordinates
chrLK032108:-:271538..273116
Molecular Weight (calculated)
48905.9 Da
IEP (calculated)
5.049
GRAVY (calculated)
-0.186
Length
450 amino acids
Sequence
(BLAST)
001: MATTPHFLTL PSLLLASVVI FLLSSKTSAI GINYGTQGNL PPPQQVVDFI KTKTIIDSVK IYDANPDILR ALSGTGIDVT IMVPNGNIPA LANVENARQW
101: VGANVLPFHQ QTKIKYICVG NEILLTKDNN LISNLIPAMQ SLHEALKVSG LPDMKVTTPH AFTVVYNQNA PSESRFNDEQ KDIFAKILEF NRQAKSPFMI
201: SAYPYFMVDP NNVNYAIFGP SNAITDTKTG KTYNNMFDAV MDATYSAMNA LGYGDVDIAV GETGWPSACD AAWCTPQNAA NYNINIIKRS QNIGTPLMPN
301: RHVDIYLFAL FNEDGKPGPT SEKNWGLFKP DFSPVYDVGV LRGGDTGPPP SSSEKWCVAK QEATNEQLQA NIDWVCSQGI DCKNISPDGI CFDNNNMKAR
401: SSFVMNVYYQ SKGGSEEACN FSGSGVVTTT NPSTSSCVMQ NVEGGSVHGT
Best Arabidopsis Sequence Match ( AT2G39640.1 )
(BLAST)
001: MAKTIRSFIL PFLLIVAGVI FQLSAVTSAI GINYGTLGNL QPPQQVVDFI KTKTTFDSVK IYDANPDILR AFAGSEINIT IMVPNGNIPA MVNVANARQW
101: VAANVLPFQQ QIKFKYVCVG NEILASNDNN LISNLVPAMQ SLNEALKASN LTYIKVTTPH AFTISYNRNT PSESRFTNDQ KDIFTKILEF HRQAKSPFMI
201: NAYTFFTMDT NNVNYAIFGP SNAITDTNTQ QTYTNMFDAV MDATYSAMKA LGYGDVDIAV GETGWPTACD ASWCSPQNAE NYNLNIIKRA QVIGTPLMPN
301: RHIDIFIFAL FNEDGKPGPT RERNWGIFKP DFSPMYDVGV LKGGGSPLPF PPINNNGKWC VGKPEATLMQ LQANIDWVCS HGIDCTPISP GGICFDNNNM
401: TTRSSFIMNA YYQSKGCVDV VCDFSGTGIV TSTNPSTSTC PIPIGEGGGG NGAKSKSANW CMAKQEATET QLQANIDWVC SQGIDCKPIS PGGICFDNNN
501: MKTRSTFIMN AYYESKGYSK DACDFRGSGI VTTTNPSTST CVVPASVTL
Arabidopsis Description
Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:O48812]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.