Factsheet for VIT_00s0179g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g084100.2.1	Tomato	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	37.81	51.88
Solyc06g082700.1.1	Tomato	cytosol, peroxisome, plastid	19.45	50.0
PGSC0003DMT400078131	Potato	golgi, vacuole	40.82	47.6
VIT_00s0179g00140.t01	Wine grape	vacuole	51.23	39.45
PGSC0003DMT400057134	Potato	mitochondrion	23.84	29.79
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	22.74	25.08
VIT_16s0050g02680.t01	Wine grape	nucleus	18.9	23.39
VIT_11s0016g03180.t01	Wine grape	nucleus	24.93	22.98
VIT_09s0002g03530.t01	Wine grape	nucleus	23.29	22.85
VIT_16s0022g02210.t01	Wine grape	nucleus	22.47	21.93
VIT_09s0002g03600.t01	Wine grape	nucleus	21.64	21.88
VIT_06s0004g05460.t01	Wine grape	nucleus	23.56	21.88
VIT_13s0019g02200.t01	Wine grape	plastid	23.29	21.25
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	22.74	21.12
VIT_11s0016g01780.t01	Wine grape	plastid	28.49	19.89
VIT_04s0008g01420.t01	Wine grape	cytosol	28.49	18.87
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	26.85	17.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100240942	MapMan:18.4.24.2.10	Gene3D:3.60.40.10	ProteinID:CBI25040
ProteinID:CBI25040.3	UniProt:D7T3F9	EMBL:FN595511	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51257	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF397	SMART:SM00332
SUPFAM:SSF81606	SignalP:SignalP-noTM	UniParc:UPI0001BE24AC	ArrayExpress:VIT_00s0179g00110	EnsemblPlantsGene:VIT_00s0179g00110	EnsemblPlants:VIT_00s0179g00110.t01
RefSeq:XP_010646118.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:7370340..7374141

Molecular Weight (calculated)

40394.3 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.133

Length

365 amino acids

Sequence
(BLAST)

001: MNEFKIVSLL LGLFVCRIPS SNGVSVSCMM VYDEGGAAAV FRSPECPDWK PIHNQTLNCQ FATIRGWREY QEDRISCDLD MKIPLLDEGK REPREMRVGV
101: VGVFDGHGGE EASDMASKLF MDYFLLHTIF NIYKKMIAFN KEQDTDLQSK EGDESLQMKI LREALLRTIH EIDLKFSEEA VQSNLHAGST ATVVVIIDGQ
201: ILVGNVGDSK ALLCSEKKSK SHQVTQGRIY FSAQELTRDH HPDREDERAR IEASGGSIIV WGVPRVNGIL AMSRSIGDVY LKRHGVISTP ELTGWRALTA
301: NDSYLVVASD GIFESLTPDD ICDFIGHQKS GLSSSSSLAD CIVDIAFEKG STDNLSVIVV PLISK

Best Arabidopsis Sequence Match ( AT3G63340.12 )
(BLAST)

001: MTSSIKSSLL NLGLLIIFFV FFFLVINCRG ESSTCLAVYK QGGAPAVFQS PKCPRWILQN WGSPTHSGAG RCHTAAIQGR RNYQEDRLLC ALDLRIPFPG
101: KTGTPKDVLV GIAAVFDGHN GAEASDMASK LLLDYFALHI NFLLDATFSA MTRKLIGRFP TKGDHSVILH GVSRDEIMHL YNLDFQMQFR DSLPLHFDDS
201: LPLDIMKEAL LRAIHDIDVT FTKEASNRKL NSGSTATIAL IADGQLMVAS IGDSKALLCS EKFETLEEAR ATLVKLYRER RRNRGSSPSR FSDFKLEHGN
301: GLLRFIAKEL TKDHHPNRED EKIRVEAAGG YVTEWAGVPR VNGQLTVSRA IGDLTYRSYG VISAPEVMDW QPLVANDSFL VVSSDGIFEK LEVQEVCDLL
401: WEVNNQTSSG AGVPSYCSIS LADCLVNTAF EKGSMDNMAA VVVPLKSNLV TQLQRKEQSM NDNKDKIASA LPCSNCTLPL PNDINLGPLQ LKQAQPLGTM
501: FNRLLRLKTE VFAAFICQRT LLGHLKGK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G63340]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.