Factsheet for VIT_00s0179g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 3
plastid 1
vacuole 5
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0179g00110.t01	Wine grape	vacuole	39.45	51.23
AT3G63320.1	Thale cress	plastid	45.15	50.59
Os11t0586001-00	Rice	golgi	49.58	47.09
Zm00001d007528_P001	Maize	extracellular, vacuole	22.78	42.52
Zm00001d007529_P001	Maize	nucleus	38.82	36.08
KRH71372	Soybean	vacuole	62.24	27.49
CDX93912	Canola	plasma membrane, vacuole	55.7	25.48
CDY53715	Canola	plasma membrane, vacuole	55.06	25.22
Bra040446.1-P	Field mustard	plasma membrane, vacuole	55.06	24.65
AT3G63340.2	Thale cress	golgi, plasma membrane	55.7	24.56
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	17.09	24.47
VIT_16s0050g02680.t01	Wine grape	nucleus	14.77	23.73
VIT_09s0002g03530.t01	Wine grape	nucleus	17.93	22.85
VIT_09s0002g03600.t01	Wine grape	nucleus	17.3	22.71
GSMUA_Achr2P08890_001	Banana	mitochondrion	51.69	22.71
VIT_06s0004g05460.t01	Wine grape	nucleus	18.14	21.88
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	17.93	21.63
KXG28797	Sorghum	golgi, plasma membrane, vacuole	48.1	21.37
TraesCS7B01G297000.2	Wheat	plasma membrane	47.89	21.27
TraesCS7A01G395000.1	Wheat	plasma membrane, vacuole	47.89	21.27
VIT_11s0016g03180.t01	Wine grape	nucleus	17.72	21.21
TraesCS7D01G390600.1	Wheat	plasma membrane	47.68	21.18
VIT_13s0019g02200.t01	Wine grape	plastid	17.51	20.75
HORVU7Hr1G093200.5	Barley	endoplasmic reticulum, plastid	48.1	20.69
VIT_16s0022g02210.t01	Wine grape	nucleus	16.24	20.59
Solyc09g065650.2.1	Tomato	mitochondrion	38.82	19.7
VIT_11s0016g01780.t01	Wine grape	plastid	21.1	19.12
VIT_04s0008g01420.t01	Wine grape	cytosol	21.73	18.69
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	19.2	16.61
Zm00001d007554_P001	Maize	cytosol	0.84	1.65
Os11t0586100-01	Rice	cytosol	0.0	0.0
Zm00001d007530_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100263200	wikigene:100263200	MapMan:18.4.24.2.10	ProteinID:CCB49576
ProteinID:CCB49576.1	UniProt:F6HBI1	EMBL:FN595511	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100263200	wikigene:LOC100263200	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF266
SMART:SM00332	SUPFAM:SSF81606	SignalP:SignalP-noTM	UniParc:UPI0002108761	ArrayExpress:VIT_00s0179g00140	EnsemblPlantsGene:VIT_00s0179g00140
EnsemblPlants:VIT_00s0179g00140.t01	RefSeq:XP_002274621	RefSeq:XP_002274621.2	:	:	:

Description

No Description!

Coordinates

chrUn:-:7407173..7413498

Molecular Weight (calculated)

52588.2 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.267

Length

474 amino acids

Sequence
(BLAST)

001: MIQTSRILLF LLWFLASQTP PLNGESSTCL MVYKEGGAPA VFQSPKCPSW RLSNDASRPR TVTCQSAMSQ GRRKSQEDRT FCALDVRIPF PRSTGLAEVM
101: VGIVAVFDGH NGAEASEMAS KLLFEYFILH TYFLLDATYS VVLKKSTGRL PDKEKQDIVF QVLHWDDELG RHQSDLERFK FTIPAKFDGN FHLEILKESL
201: LRAIHDIDKT FSKEASRNNL DSGSTATVIL IADGQILVAN VGDSKALLCS EKFQSPAEAK VTLSRLYRQR RRSGAISPLK DYENSKFLSS NGLAHFSVKE
301: LTRDHHPDRD DEKSRVESAG GYVYEWGGVA RVNGQLAVSR AIGDLSFKSY GVIPTPEVTD WQPLTTNDSY LVAASDGIFE KLSSQEVCDL LWEVHVHPKM
401: RSGFSSSCSY SLAECIVNTA FEKGSMDNMA TVVVPLRSTG FSQALLEERC DGAGDIDCSD LGPQHFIYKQ SGNS

Best Arabidopsis Sequence Match ( AT3G63340.12 )
(BLAST)

001: MTSSIKSSLL NLGLLIIFFV FFFLVINCRG ESSTCLAVYK QGGAPAVFQS PKCPRWILQN WGSPTHSGAG RCHTAAIQGR RNYQEDRLLC ALDLRIPFPG
101: KTGTPKDVLV GIAAVFDGHN GAEASDMASK LLLDYFALHI NFLLDATFSA MTRKLIGRFP TKGDHSVILH GVSRDEIMHL YNLDFQMQFR DSLPLHFDDS
201: LPLDIMKEAL LRAIHDIDVT FTKEASNRKL NSGSTATIAL IADGQLMVAS IGDSKALLCS EKFETLEEAR ATLVKLYRER RRNRGSSPSR FSDFKLEHGN
301: GLLRFIAKEL TKDHHPNRED EKIRVEAAGG YVTEWAGVPR VNGQLTVSRA IGDLTYRSYG VISAPEVMDW QPLVANDSFL VVSSDGIFEK LEVQEVCDLL
401: WEVNNQTSSG AGVPSYCSIS LADCLVNTAF EKGSMDNMAA VVVPLKSNLV TQLQRKEQSM NDNKDKIASA LPCSNCTLPL PNDINLGPLQ LKQAQPLGTM
501: FNRLLRLKTE VFAAFICQRT LLGHLKGK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G63340]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.