Factsheet for Solyc03g043720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g076840.2.1
Solyc03g043720.2.1
Solyc03g083030.2.1
Solyc04g024530.2.1
Solyc05g013940.2.1
Solyc09g014980.2.1
Solyc09g092180.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22640.1	Solyc04g024530.2.1	AT1G13180.1	17267444
AT2G22640.1	Solyc05g013940.2.1	AT1G13180.1	17267444
AT2G22640.1	Solyc02g076840.2.1	AT1G29170.1	15534215
AT2G22640.1	Solyc02g076840.2.1	AT1G29170.1	17267444
AT2G22640.1	Solyc03g043720.2.1	AT2G22640.1	17267444
AT2G22640.1	Solyc03g043720.2.1	AT2G22640.1	21798944
AT2G22640.1	Solyc03g043720.2.1	AT2G22640.1	25262777
AT2G22640.1	Solyc09g014980.2.1	AT2G38440.1	16043432
AT2G22640.1	Solyc09g014980.2.1	AT2G38440.1	17267444
AT2G22640.1	Solyc09g092180.2.1	AT3G23910.1	21798944
AT2G22640.1	Solyc03g083030.2.1	AT3G49290.1	17267444
AT2G22640.1	Solyc03g083030.2.1	AT5G24310.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043032	Potato	cytosol	89.47	100.0
AT2G22640.1	Thale cress	cytosol	77.89	87.06
Bra030221.1-P	Field mustard	cytosol	77.89	86.05
CDX89497	Canola	cytosol	77.89	86.05
CDY25614	Canola	cytosol	77.89	86.05
KRH74448	Soybean	cytosol	75.79	84.71
GSMUA_Achr4P11860_001	Banana	cytosol	74.74	84.52
Bra039922.1-P	Field mustard	cytosol	45.26	84.31
KRH39504	Soybean	cytosol	74.74	83.53
CDY13739	Canola	cytosol	69.47	82.5
EES07816	Sorghum	cytosol	71.58	80.95
Os02t0829900-01	Rice	cytosol	72.63	80.23
GSMUA_Achr9P23800_001	Banana	cytosol	70.53	79.76
TraesCS2A01G196600.1	Wheat	cytosol	72.63	78.41
TraesCS2B01G224200.1	Wheat	cytosol	72.63	78.41
TraesCS2D01G204600.1	Wheat	cytosol	72.63	78.41
VIT_00s0211g00050.t01	Wine grape	cytosol	40.0	70.37
HORVU2Hr1G062760.2	Barley	cytosol	40.0	43.68

Protein Annotations

Gene3D:1.20.5.110	MapMan:20.2.2.2.3	InterPro:BRICK1	ncoils:Coil	GO:GO:0000902	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005886	GO:GO:0007015	GO:GO:0008064	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987
GO:GO:0010090	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154	GO:GO:0031209	GO:GO:0032403
GO:GO:0042802	GO:GO:0044877	GO:GO:0048870	GO:GO:0051259	GO:GO:0071944	UniProt:K4BFZ3
PFAM:PD593487	PANTHER:PTHR33668	EnsemblPlantsGene:Solyc03g043720.2	EnsemblPlants:Solyc03g043720.2.1	UniParc:UPI0002767F90	SEG:seg

Description

Protein BRICK 1 [Source:Projected from Arabidopsis thaliana (AT2G22640) UniProtKB/Swiss-Prot;Acc:Q94JY4]

Coordinates

chr3:+:7240738..7241484

Molecular Weight (calculated)

10735.0 Da

IEP (calculated)

5.864

GRAVY (calculated)

-0.005

Length

95 amino acids

Sequence
(BLAST)

1: MLAFEEQRRI MARAGGITNA VNVGIAVQAD WENREFISHI SLNVRKLFDF LVQFEATTKS KLATLNEKLD TLERRLELLE VQVSTATANP ALFNV

Best Arabidopsis Sequence Match ( AT2G22640.1 )
(BLAST)

1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT

Arabidopsis Description

BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.