Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039922.1-P | Field mustard | cytosol | 60.0 | 94.12 |
| CDX89497 | Canola | cytosol | 95.0 | 88.37 |
| CDY25614 | Canola | cytosol | 95.0 | 88.37 |
| AT2G22640.1 | Thale cress | cytosol | 93.75 | 88.24 |
| PGSC0003DMT400043032 | Potato | cytosol | 82.5 | 77.65 |
| KRH74448 | Soybean | cytosol | 82.5 | 77.65 |
| KRH39504 | Soybean | cytosol | 81.25 | 76.47 |
| GSMUA_Achr4P11860_001 | Banana | cytosol | 78.75 | 75.0 |
| Os02t0829900-01 | Rice | cytosol | 76.25 | 70.93 |
| TraesCS2A01G196600.1 | Wheat | cytosol | 77.5 | 70.45 |
| TraesCS2B01G224200.1 | Wheat | cytosol | 77.5 | 70.45 |
| TraesCS2D01G204600.1 | Wheat | cytosol | 77.5 | 70.45 |
| VIT_00s0211g00050.t01 | Wine grape | cytosol | 47.5 | 70.37 |
| GSMUA_Achr9P23800_001 | Banana | cytosol | 73.75 | 70.24 |
| Solyc03g043720.2.1 | Tomato | cytosol | 82.5 | 69.47 |
| EES07816 | Sorghum | cytosol | 72.5 | 69.05 |
| HORVU2Hr1G062760.2 | Barley | cytosol | 47.5 | 43.68 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:20.2.2.2.3 | UniProt:A0A078FLD8 | InterPro:BRICK1 | EnsemblPlants:CDY13739 | ProteinID:CDY13739 |
| ProteinID:CDY13739.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0031209 | GO:GO:0032403 | GO:GO:0044877 | EnsemblPlantsGene:GSBRNA2T00078171001 | PFAM:PD593487 |
| PANTHER:PTHR33668 | UniParc:UPI0004EE065A | : | : | : | : |
Description
BnaA09g42410DBnaA09g42410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLD8]
Coordinates
chrLK032038:-:73562..74006
Molecular Weight (calculated)
8809.6 Da
IEP (calculated)
5.800
GRAVY (calculated)
0.074
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKAGGGGIT NAVNVGIAVQ ADWENREFIS HISLNVRRLF EFLLQFESTT KSKLDVLERR LEMLEVQVST AAANPSLFAT
1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT
Arabidopsis Description
BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.