Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030221.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX89497 | Canola | cytosol | 100.0 | 100.0 |
| AT2G22640.1 | Thale cress | cytosol | 98.84 | 100.0 |
| CDY13739 | Canola | cytosol | 88.37 | 95.0 |
| PGSC0003DMT400043032 | Potato | cytosol | 86.05 | 87.06 |
| KRH74448 | Soybean | cytosol | 84.88 | 85.88 |
| KRH39504 | Soybean | cytosol | 83.72 | 84.71 |
| GSMUA_Achr4P11860_001 | Banana | cytosol | 80.23 | 82.14 |
| Os02t0829900-01 | Rice | cytosol | 77.91 | 77.91 |
| Solyc03g043720.2.1 | Tomato | cytosol | 86.05 | 77.89 |
| TraesCS2A01G196600.1 | Wheat | cytosol | 79.07 | 77.27 |
| TraesCS2B01G224200.1 | Wheat | cytosol | 79.07 | 77.27 |
| TraesCS2D01G204600.1 | Wheat | cytosol | 79.07 | 77.27 |
| GSMUA_Achr9P23800_001 | Banana | cytosol | 74.42 | 76.19 |
| EES07816 | Sorghum | cytosol | 74.42 | 76.19 |
| VIT_00s0211g00050.t01 | Wine grape | cytosol | 45.35 | 72.22 |
| HORVU2Hr1G062760.2 | Barley | cytosol | 43.02 | 42.53 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:20.2.2.2.3 | UniProt:A0A078DKU1 | InterPro:BRICK1 | EnsemblPlants:CDY25614 | ProteinID:CDY25614 |
| ProteinID:CDY25614.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0031209 | GO:GO:0032403 | GO:GO:0044877 | EnsemblPlantsGene:GSBRNA2T00032894001 | PFAM:PD593487 |
| PANTHER:PTHR33668 | UniParc:UPI0002544213 | SEG:seg | : | : | : |
Description
BnaA04g13060DBnaA04g13060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DKU1]
Coordinates
chrLK032177:+:285306..286183
Molecular Weight (calculated)
9538.5 Da
IEP (calculated)
5.827
GRAVY (calculated)
0.017
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKAGGGITN AVNVGIAVQA DWENREFISH ISLNVRRLFE FLVQFESTTK SKLASLNEKL DLLERRLEML EVQVSTATAN PSLFAT
1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT
Arabidopsis Description
BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.