Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88092 | Canola | nucleus | 97.54 | 98.75 |
| AT5G24310.1 | Thale cress | nucleus | 82.15 | 83.18 |
| CDY05919 | Canola | nucleus | 75.08 | 77.46 |
| CDY08121 | Canola | nucleus | 75.38 | 77.29 |
| CDX79218 | Canola | cytosol | 22.15 | 74.23 |
| PGSC0003DMT400047722 | Potato | nucleus | 64.0 | 65.82 |
| Solyc03g083030.2.1 | Tomato | nucleus | 64.92 | 64.92 |
| KRH64414 | Soybean | nucleus | 63.08 | 63.08 |
| KRH65850 | Soybean | nucleus | 60.62 | 60.8 |
| VIT_16s0098g01720.t01 | Wine grape | extracellular | 64.92 | 57.18 |
| KRH53518 | Soybean | endoplasmic reticulum, golgi | 64.31 | 56.95 |
| GSMUA_Achr5P09600_001 | Banana | nucleus | 28.0 | 50.84 |
| KRH65551 | Soybean | cytosol, endoplasmic reticulum, extracellular | 24.62 | 49.08 |
| GSMUA_Achr1P28080_001 | Banana | cytosol | 42.46 | 42.46 |
| CDY57047 | Canola | mitochondrion | 13.85 | 37.5 |
| CDY27664 | Canola | nucleus | 30.15 | 35.51 |
| CDY69736 | Canola | nucleus | 29.85 | 35.14 |
| CDX67526 | Canola | nucleus | 30.46 | 34.49 |
| CDY13370 | Canola | nucleus | 27.38 | 33.84 |
| CDY00780 | Canola | plastid | 23.08 | 32.05 |
| CDX79998 | Canola | nucleus | 24.62 | 26.4 |
| CDY42020 | Canola | nucleus | 24.31 | 26.07 |
| CDY26141 | Canola | cytosol | 15.69 | 25.63 |
| CDX83376 | Canola | cytosol | 22.77 | 24.1 |
| CDY68381 | Canola | cytosol | 22.46 | 23.78 |
| CDX99519 | Canola | cytosol | 12.62 | 21.24 |
| CDY61083 | Canola | cytosol | 10.77 | 21.08 |
| CDY39460 | Canola | cytosol | 10.77 | 21.08 |
| CDY32903 | Canola | cytosol | 10.15 | 19.88 |
| CDX86786 | Canola | mitochondrion, plastid | 9.85 | 13.39 |
Protein Annotations
| EnsemblPlants:CDX80429 | EnsemblPlantsGene:GSBRNA2T00133503001 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 | ProteinID:CDX80429 |
| ProteinID:CDX80429.1 | SEG:seg | UniParc:UPI0004EF4601 | MapMan:20.2.2.2.5 | : | : |
Description
BnaC07g30150D
Coordinates
chrLK031821:+:415093..418153
Molecular Weight (calculated)
37024.9 Da
IEP (calculated)
10.201
GRAVY (calculated)
-0.852
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAATMHMP REGSNYDEIS MQQSLLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDGDTHS VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDQVTG
101: TELRVACIEQ RLRMCQEYMD HEGRSQQSLV INTPKFHKRY ILPSGEIKKG GNLAKLKSVE SSIGEEADWN QFRNAVRTTI RETPPPPLLR KPVLPSPPPQ
201: RKTQRSATFS FSSISNTAPK KEQDKRAVSP HRFPLLRSGS VAIRPTSVSR PTTPSKSRTI TPKRYPSEPR RSASVRAAFE KEAQREPEQQ QQQQQPSKSK
301: RLLKALLSRR KTKKDDTLYT YLDEY
101: TELRVACIEQ RLRMCQEYMD HEGRSQQSLV INTPKFHKRY ILPSGEIKKG GNLAKLKSVE SSIGEEADWN QFRNAVRTTI RETPPPPLLR KPVLPSPPPQ
201: RKTQRSATFS FSSISNTAPK KEQDKRAVSP HRFPLLRSGS VAIRPTSVSR PTTPSKSRTI TPKRYPSEPR RSASVRAAFE KEAQREPEQQ QQQQQPSKSK
301: RLLKALLSRR KTKKDDTLYT YLDEY
001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
Arabidopsis Description
ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.