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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000416.1-P Field mustard cytosol 81.59 64.14
CDY68381 Canola cytosol 81.17 63.19
CDX83376 Canola cytosol 81.17 63.19
CDX79998 Canola nucleus 67.78 53.47
CDY42020 Canola nucleus 66.95 52.81
AT2G46225.2 Thale cress nucleus 70.29 51.06
KRH06553 Soybean nucleus 41.84 32.15
KRH48004 Soybean nucleus 40.17 30.87
KRH68849 Soybean cytosol 38.08 30.74
KRG97096 Soybean cytosol 37.24 29.57
VIT_15s0046g01640.t01 Wine grape cytosol 37.24 29.47
Solyc01g095280.2.1 Tomato nucleus 35.15 27.54
PGSC0003DMT400000237 Potato cytosol 35.98 26.22
EES03303 Sorghum nucleus 25.52 20.68
TraesCS3D01G228600.1 Wheat cytosol 25.1 19.87
TraesCS3A01G225000.2 Wheat cytosol, plastid 25.1 19.67
Os01t0622700-01 Rice plasma membrane 25.1 19.61
TraesCS3B01G254600.1 Wheat cytosol 24.69 19.34
GSMUA_Achr3P31930_001 Banana nucleus 15.9 18.91
TraesCS1D01G433300.1 Wheat nucleus 21.76 17.51
Zm00001d009707_P001 Maize cytosol, mitochondrion, nucleus, plastid 21.76 17.45
KXG22631 Sorghum cytosol 21.34 17.17
TraesCS1A01G424300.1 Wheat nucleus 21.76 17.16
TraesCS1B01G456600.1 Wheat nucleus 21.76 17.05
GSMUA_Achr3P15790_001 Banana nucleus 17.15 16.4
Os05t0585400-01 Rice cytosol, mitochondrion, nucleus 20.5 16.23
HORVU1Hr1G092730.1 Barley plastid 22.59 15.56
GSMUA_Achr6P31890_001 Banana nucleus 11.72 14.07
CDX99519 Canola cytosol 11.3 13.99
Zm00001d044184_P001 Maize plastid 24.27 13.88
CDY32903 Canola cytosol 8.79 12.65
CDY61083 Canola cytosol 8.79 12.65
CDY39460 Canola cytosol 8.37 12.05
GSMUA_Achr7P24740_001 Banana nucleus 10.46 11.79
GSMUA_Achr9P05390_001 Banana cytosol, nucleus, plastid 12.13 10.9
CDY26141 Canola cytosol 8.79 10.55
CDY05919 Canola nucleus 13.39 10.16
CDY08121 Canola nucleus 13.39 10.09
CDX88092 Canola nucleus 13.39 9.97
CDX80429 Canola nucleus 13.39 9.85
CDY57047 Canola mitochondrion 4.6 9.17
CDX67526 Canola nucleus 9.21 7.67
CDY13370 Canola nucleus 8.37 7.6
CDY27664 Canola nucleus 7.95 6.88
CDY69736 Canola nucleus 7.95 6.88
CDY00780 Canola plastid 3.77 3.85
HORVU2Hr1G001180.6 Barley cytosol 0.84 2.38
CDX79218 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX86786EnsemblPlantsGene:GSBRNA2T00145520001InterPro:ABIPANTHER:PTHR10460PANTHER:PTHR10460:SF14ProteinID:CDX86786
ProteinID:CDX86786.1UniParc:UPI0004EEC40BMapMan:35.1:::
Description
BnaA09g21760D
Coordinates
chrLK031847:+:691401..692552
Molecular Weight (calculated)
26197.5 Da
IEP (calculated)
10.658
GRAVY (calculated)
-0.322
Length
239 amino acids
Sequence
(BLAST)
001: MQLRASCVSQ QLLTSRTYID KEGLRQQQLL AVIPMHHKHY TLPNSVNKRV HFSPLRRTDT RQNHYQVDIS RLQPSGAMSP SWSLIDVLVV VINCNCLSNG
101: LVLTHLDAPS SKSLSWHLGS ETKSTLKGTT TVASSSKDSK AFVKTSGVFH LSGDEENIIN KKPFVGGSQV SGVPATSTIT RQTYGVAHKA VEVPKLTTAH
201: KSHDNPRGEI IQAPVRTKSV MSAFFVKPKT PKLKAGYVS
Best Arabidopsis Sequence Match ( AT2G46225.2 )
(BLAST)
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGAMSSSL SLLVNNTSSQ ISNSLSNMLG
201: LTHLDAPASK SLSWHLGSET KSTLKGTSTV APSSKDSKAF SKTSGVFHLL GDDENIANKK PLAGSQVSGV PAASTAHKDL EVPKLLTAHR SLDNNPRREI
301: IQAPVRTKSV LSAFFVKQKT PKLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.