Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83376 | Canola | cytosol | 91.21 | 91.21 |
| CDX79998 | Canola | nucleus | 80.46 | 81.52 |
| CDX86786 | Canola | mitochondrion, plastid | 63.19 | 81.17 |
| CDY42020 | Canola | nucleus | 78.5 | 79.54 |
| AT2G46225.2 | Thale cress | nucleus | 80.46 | 75.08 |
| CDY57047 | Canola | mitochondrion | 28.01 | 71.67 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 36.81 | 56.22 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 54.4 | 55.3 |
| KRH06553 | Soybean | nucleus | 54.72 | 54.02 |
| KRH48004 | Soybean | nucleus | 53.42 | 52.73 |
| KRH68849 | Soybean | cytosol | 49.51 | 51.35 |
| Solyc01g095280.2.1 | Tomato | nucleus | 50.16 | 50.49 |
| KRG97096 | Soybean | cytosol | 48.53 | 49.5 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 31.92 | 49.25 |
| CDY26141 | Canola | cytosol | 31.6 | 48.74 |
| PGSC0003DMT400000237 | Potato | cytosol | 50.49 | 47.26 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 31.27 | 45.28 |
| EES03303 | Sorghum | nucleus | 43.32 | 45.08 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 36.16 | 44.4 |
| TraesCS3D01G228600.1 | Wheat | cytosol | 43.32 | 44.04 |
| Os01t0622700-01 | Rice | plasma membrane | 43.65 | 43.79 |
| TraesCS3B01G254600.1 | Wheat | cytosol | 43.32 | 43.61 |
| TraesCS3A01G225000.2 | Wheat | cytosol, plastid | 43.32 | 43.61 |
| TraesCS1D01G433300.1 | Wheat | nucleus | 41.04 | 42.42 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 40.07 | 41.28 |
| KXG22631 | Sorghum | cytosol | 39.74 | 41.08 |
| TraesCS1B01G456600.1 | Wheat | nucleus | 40.72 | 40.98 |
| TraesCS1A01G424300.1 | Wheat | nucleus | 40.07 | 40.59 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 39.41 | 40.07 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 33.55 | 38.72 |
| CDX79218 | Canola | cytosol | 12.05 | 38.14 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 10.1 | 36.9 |
| HORVU1Hr1G092730.1 | Barley | plastid | 40.72 | 36.02 |
| CDY32903 | Canola | cytosol | 18.89 | 34.94 |
| CDY39460 | Canola | cytosol | 18.89 | 34.94 |
| CDY61083 | Canola | cytosol | 18.89 | 34.94 |
| CDX99519 | Canola | cytosol | 21.17 | 33.68 |
| Zm00001d044184_P001 | Maize | plastid | 41.37 | 30.38 |
| CDY05919 | Canola | nucleus | 23.78 | 23.17 |
| CDX88092 | Canola | nucleus | 24.1 | 23.05 |
| CDY08121 | Canola | nucleus | 23.78 | 23.03 |
| CDX80429 | Canola | nucleus | 23.78 | 22.46 |
| CDY13370 | Canola | nucleus | 19.22 | 22.43 |
| CDX67526 | Canola | nucleus | 20.52 | 21.95 |
| CDY27664 | Canola | nucleus | 19.22 | 21.38 |
| CDY69736 | Canola | nucleus | 18.89 | 21.01 |
| CDY00780 | Canola | plastid | 13.68 | 17.95 |
Protein Annotations
| EnsemblPlants:CDY68381 | EnsemblPlantsGene:GSBRNA2T00073567001 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 | ProteinID:CDY68381 |
| ProteinID:CDY68381.1 | UniParc:UPI0004EEA7CD | UniProt:A0A078JRV8 | MapMan:20.2.2.2.5 | : | : |
Description
BnaC03g72740DBnaC03g72740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRV8]
Coordinates
chrLK037250:+:3006..5055
Molecular Weight (calculated)
34146.7 Da
IEP (calculated)
10.091
GRAVY (calculated)
-0.517
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEEALVTDD PAMTFEEVSM ERSKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQSSDISTM
101: QLRASCVSQQ LLTSRTYIDK EGLRQQQLLA VIPVHHKHYT LPNSVNKRVR FSPLRRTDTR QNHYQVDISR LQPSDAPSSK SLSWHLGSET KSTLKGTTTV
201: ASSSKDSKAF VKTSGVFHLS GDEENIINKK PFVGGSQVSG VPATSTITRQ TYGVAHKAVE VPKLTTAHKS HDNPRGEIIQ APVRTKSVMS AFFVKPKTPK
301: LKAGYVS
101: QLRASCVSQQ LLTSRTYIDK EGLRQQQLLA VIPVHHKHYT LPNSVNKRVR FSPLRRTDTR QNHYQVDISR LQPSDAPSSK SLSWHLGSET KSTLKGTTTV
201: ASSSKDSKAF VKTSGVFHLS GDEENIINKK PFVGGSQVSG VPATSTITRQ TYGVAHKAVE VPKLTTAHKS HDNPRGEIIQ APVRTKSVMS AFFVKPKTPK
301: LKAGYVS
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.