CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028522.1-P	Field mustard	nucleus	100.0	100.0
CDY13370	Canola	nucleus	78.05	85.17
CDY27664	Canola	nucleus	72.13	75.0
CDY69736	Canola	nucleus	71.43	74.28
AT5G42030.2	Thale cress	cytosol	60.98	54.35
CDX79218	Canola	cytosol	16.03	47.42
GSMUA_Achr10P...	Banana	cytosol	22.3	42.67
CDY57047	Canola	mitochondrion	16.38	39.17
GSMUA_Achr7P14650_001	Banana	nucleus	20.91	34.29
VIT_02s0025g02020.t01	Wine grape	nucleus	34.84	32.15
CDY05919	Canola	nucleus	34.84	31.75
PGSC0003DMT400031954	Potato	nucleus	36.93	31.64
CDY08121	Canola	nucleus	34.84	31.55
CDX88092	Canola	nucleus	34.49	30.84
Solyc08g082710.2.1	Tomato	nucleus	35.54	30.63
CDX80429	Canola	nucleus	34.49	30.46
TraesCS3A01G159500.1	Wheat	nucleus	26.83	24.29
TraesCS3D01G166800.1	Wheat	nucleus	26.48	23.97
TraesCS3B01G190200.1	Wheat	nucleus	26.48	23.97
HORVU3Hr1G032200.1	Barley	nucleus	26.48	23.97
Os01t0236400-01	Rice	nucleus	26.13	23.66
EES02170	Sorghum	nucleus	26.13	23.36
CDY26141	Canola	cytosol	16.03	23.12
CDY42020	Canola	nucleus	22.65	21.45
CDX79998	Canola	nucleus	22.65	21.45
CDY68381	Canola	cytosol	21.95	20.52
CDX83376	Canola	cytosol	21.25	19.87
CDY32903	Canola	cytosol	11.15	19.28
GSMUA_Achr8P19680_001	Banana	nucleus	21.25	19.18
CDY00780	Canola	plastid	14.98	18.38
CDY61083	Canola	cytosol	10.45	18.07
CDY39460	Canola	cytosol	10.45	18.07
CDX99519	Canola	cytosol	10.45	15.54
CDX86786	Canola	mitochondrion, plastid	7.67	9.21

Protein Annotations

EnsemblPlants:CDX67526	EnsemblPlantsGene:GSBRNA2T00098649001	InterPro:ABI	PANTHER:PTHR10460	PANTHER:PTHR10460:SF10	ProteinID:CDX67526
ProteinID:CDX67526.1	SEG:seg	UniParc:UPI00025433F9	MapMan:20.2.2.2.5	:	:

Description

BnaA07g15660D

Coordinates

chrLK031787:-:767655..769654

Molecular Weight (calculated)

32589.7 Da

IEP (calculated)

10.660

GRAVY (calculated)

-0.759

Length

287 amino acids

Sequence
(BLAST)

001: METSTSLAIV LHQSSNHDEL FMQQTLQFSQ TLKDLRNLRK QLYSAAEYFE TSYGKEEHKE TVIETLKEYA AKAVVNTVDH LGSVSDKFNS FLSDDSAHFS
101: TTHLRLSSLE QRMKLCREYM GKSGTSQHCF LIQSPPHHHK RYFFPQHGRG ERGRGTSFSA GDDSHRFKNA VRSTILENHP ITTTRKAYKT GSFSFLHNNN
201: ISNNRTPNSK RGNSPMRFPL LRSGSQLKHS SSPGQPRILA LLPEPERAIS LSTSREIVEI KQKSSLRKGK KSLMLKALMS MSSKSRN

Best Arabidopsis Sequence Match ( AT5G42030.1 )
(BLAST)

001: MASSTSLAIV LHQSSNHDEL FMKQTLQFSE TLKDLKNLRK QLYSAAEYFE TSYGKAEHKE TVIETLKEYA AKAVVNTVDH LGSVSDKFNS FLSDNSTHFS
101: TTHLRLSSLE QRMRLCRDYM GKSGTHQHLL LFQYPRHHKR YFFPQQGRGT SFSAGDDSHR FTSAVRSTIL ENLPNTARKA NKTGSFSFAP IVHNNINNRT
201: PNKRSNSPMR FPLLRSGSLL KRSSSPSQPK KPPLALPEPQ RAISVSRNTE IVEIKQSSSR KGKKILMFKA LMSMSKSRN

Arabidopsis Description

ABIL4ABL interactor-like protein 4 [Source:TAIR;Acc:AT5G42030]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.