Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G166800.1 | Wheat | nucleus | 98.42 | 98.42 |
| TraesCS3B01G190200.1 | Wheat | nucleus | 96.53 | 96.53 |
| TraesCS3A01G159500.1 | Wheat | nucleus | 96.21 | 96.21 |
| Os01t0236400-01 | Rice | nucleus | 79.18 | 79.18 |
| EES02170 | Sorghum | nucleus | 76.97 | 76.01 |
| GSMUA_Achr10P... | Banana | cytosol | 27.76 | 58.67 |
| GSMUA_Achr7P14650_001 | Banana | nucleus | 27.76 | 50.29 |
| CDX79218 | Canola | cytosol | 14.51 | 47.42 |
| HORVU1Hr1G011420.2 | Barley | nucleus | 29.02 | 28.4 |
| VIT_02s0025g02020.t01 | Wine grape | nucleus | 27.76 | 28.3 |
| GSMUA_Achr8P19680_001 | Banana | nucleus | 27.44 | 27.36 |
| CDY27664 | Canola | nucleus | 23.66 | 27.17 |
| Bra025451.1-P | Field mustard | nucleus | 23.66 | 27.17 |
| CDY69736 | Canola | nucleus | 23.34 | 26.81 |
| CDX67526 | Canola | nucleus | 23.97 | 26.48 |
| Bra028522.1-P | Field mustard | nucleus | 23.97 | 26.48 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 6.94 | 26.19 |
| PGSC0003DMT400031954 | Potato | nucleus | 27.44 | 25.97 |
| CDY13370 | Canola | nucleus | 21.14 | 25.48 |
| Solyc08g082710.2.1 | Tomato | nucleus | 26.18 | 24.92 |
| CDY00780 | Canola | plastid | 16.4 | 22.22 |
| AT5G42030.2 | Thale cress | cytosol | 22.4 | 22.05 |
| HORVU1Hr1G092730.1 | Barley | plastid | 20.82 | 19.02 |
| HORVU3Hr1G073240.2 | Barley | plastid | 13.56 | 11.85 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G032200.1 | EnsemblPlantsGene:HORVU3Hr1G032200 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF16 | UniParc:UPI000296E5D9 |
| UniProt:M0XVD5 | MapMan:20.2.2.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:163427905..163431108
Molecular Weight (calculated)
36133.4 Da
IEP (calculated)
10.290
GRAVY (calculated)
-0.889
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVAMSPSS VSSHNLDAAS TSDDMPSSQE GLLFSDSLKD LRNLRSQLYS AAEYFEVFYT NNSHRSTVVT SLKDYAVEAL VSTVDHLGFV SYKVDNLVNE
101: KADEVNETEF RVSSVEQRVK ICQQAIDQEG RSQQSLLIRA PQYHRRYILP GADILESAIH PVSEPTRYSR QHTGRKMRKS QSAMSTPVSR QTTMRSIRSQ
201: SPTVRETHHR SRSMSPSRKA RAKSPSPQVM NLNPKETRAG SPIPTPPNPL ARSATVARRP PLDPKHFRQT SMQVQSDYEN QKEREKRPSK GRGFLKSLLT
301: RRRWRNDESL YNYLDEY
101: KADEVNETEF RVSSVEQRVK ICQQAIDQEG RSQQSLLIRA PQYHRRYILP GADILESAIH PVSEPTRYSR QHTGRKMRKS QSAMSTPVSR QTTMRSIRSQ
201: SPTVRETHHR SRSMSPSRKA RAKSPSPQVM NLNPKETRAG SPIPTPPNPL ARSATVARRP PLDPKHFRQT SMQVQSDYEN QKEREKRPSK GRGFLKSLLT
301: RRRWRNDESL YNYLDEY
001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
Arabidopsis Description
ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.