Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G073300.4 | Wheat | nucleus | 91.05 | 92.19 |
| TraesCS1D01G056800.2 | Wheat | nucleus | 90.74 | 91.59 |
| TraesCS1A01G056100.1 | Wheat | nucleus | 89.81 | 91.22 |
| OQU87007 | Sorghum | cytosol | 34.57 | 73.2 |
| Os01t0551800-01 | Rice | nucleus | 70.99 | 71.21 |
| Zm00001d044520_P001 | Maize | nucleus | 64.2 | 63.61 |
| HORVU3Hr1G032200.1 | Barley | nucleus | 28.4 | 29.02 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 7.1 | 27.38 |
| HORVU1Hr1G092730.1 | Barley | plastid | 22.22 | 20.75 |
| HORVU3Hr1G073240.2 | Barley | plastid | 12.04 | 10.74 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G011420.2 | EnsemblPlantsGene:HORVU1Hr1G011420 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 | SEG:seg |
| UniParc:UPI000B463FA9 | UniProt:A0A287EMK8 | MapMan:20.2.2.2.5 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:27449004..27453492
Molecular Weight (calculated)
36017.1 Da
IEP (calculated)
10.702
GRAVY (calculated)
-0.585
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEAAGPFRR RGGTMEEVRM EEAFIFSETI KDLKALRPQL YSAAEYFELA YVQEAGKQAV MSNLKEYAVK ALVNTVDHLG SISFKVSSLV DQRFDEVAQA
101: NLRVSCIQQR TQAVQACVNR EGLVQQSLVI PAPKYHKRYI LPVISAGGDS IPNAMPNFSA MNKVKNRATT QMHQAFSAAA SAAQTKNKDK QASFRKLRSI
201: ARAPSQSARS SSPAQHPRFV PPSDTAIPIK RDKRSDSPIY STTPLTRSGS LSKKSSLLKT SSVRVQMQTT SDPKRLVPLR SYADRYNDDS KESEQTLKKS
301: KKFLKSLLSR RKSGKEEPLQ DSVP
101: NLRVSCIQQR TQAVQACVNR EGLVQQSLVI PAPKYHKRYI LPVISAGGDS IPNAMPNFSA MNKVKNRATT QMHQAFSAAA SAAQTKNKDK QASFRKLRSI
201: ARAPSQSARS SSPAQHPRFV PPSDTAIPIK RDKRSDSPIY STTPLTRSGS LSKKSSLLKT SSVRVQMQTT SDPKRLVPLR SYADRYNDDS KESEQTLKKS
301: KKFLKSLLSR RKSGKEEPLQ DSVP
001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
Arabidopsis Description
ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.