Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU87007 Sorghum cytosol 38.7 81.7
TraesCS7A01G334100.2 Wheat nucleus 75.23 74.31
TraesCS7D01G341700.2 Wheat nucleus 75.23 74.31
TraesCS7B01G245700.1 Wheat nucleus 74.92 74.01
TraesCS1A01G056100.1 Wheat nucleus 71.52 72.41
TraesCS1D01G056800.2 Wheat nucleus 71.52 71.96
TraesCS1B01G073300.4 Wheat nucleus 71.21 71.88
HORVU1Hr1G011420.2 Barley nucleus 71.21 70.99
Zm00001d044520_P001 Maize nucleus 69.66 68.81
Os01t0236400-01 Rice nucleus 33.44 34.07
Os05t0585400-01 Rice cytosol, mitochondrion, nucleus 21.67 23.18
Os01t0622700-01 Rice plasma membrane 21.05 22.22
Os01t0760900-01 Rice nucleus 13.62 17.32
Protein Annotations
EMBL:AK243249EnsemblPlants:Os01t0551800-01EnsemblPlantsGene:Os01g0551800EntrezGene:4325847GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005856InterPro:ABIPANTHER:PTHR10460PANTHER:PTHR10460:SF10
ProteinID:BAD87975.1ProteinID:BAS72655.1RefSeq:XP_015615174.1SEG:segUniParc:UPI00004C2B27UniProt:Q5JKN2
MapMan:20.2.2.2.5:::::
Description
Similar to protein ABIL1. (Os01t0551800-01)
Coordinates
chr1:+:20714138..20716704
Molecular Weight (calculated)
36124.0 Da
IEP (calculated)
10.289
GRAVY (calculated)
-0.744
Length
323 amino acids
Sequence
(BLAST)
001: MVEAVASFRR GGVGIAGMSS STLEEVQMQE TLIFSDTIKD LKMLKSQLYS AAEYFELAYT QEDDKQEVMN NLKEYSVKAL VNTVDHLGSI SFKVSSLIDQ
101: RFDEVDDTNL RVSCIHQRAQ VSQACMDKEG LSQQSLVITA PKYHKRYILP AGDGSMPNAV PNFSEMRKAK NRAAQMQQVF SAAAASQAKA KEKQPSFSKL
201: RSIARAPSQR ARSSSPAQRP PSENTIPTKR ADKRSESPIP RTTPLTRSGS LPQKPSLLKT SSVRVQMHTS EHKKLASVRS QADRNDDKEG EQTPKKGKKF
301: LKSLLSRRKS RKEEPLPCYF DDY
Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)
001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY
Arabidopsis Description
ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.