Factsheet for Os01t0236400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G166800.1	Wheat	nucleus	79.81	79.81
HORVU3Hr1G032200.1	Barley	nucleus	79.18	79.18
TraesCS3A01G159500.1	Wheat	nucleus	78.86	78.86
TraesCS3B01G190200.1	Wheat	nucleus	78.23	78.23
EES02170	Sorghum	nucleus	77.92	76.95
GSMUA_Achr10P...	Banana	cytosol	27.13	57.33
GSMUA_Achr7P14650_001	Banana	nucleus	25.87	46.86
CDX79218	Canola	cytosol	13.25	43.3
Os01t0551800-01	Rice	nucleus	34.07	33.44
VIT_02s0025g02020.t01	Wine grape	nucleus	27.76	28.3
GSMUA_Achr8P19680_001	Banana	nucleus	27.44	27.36
CDY27664	Canola	nucleus	23.03	26.45
Bra025451.1-P	Field mustard	nucleus	23.03	26.45
CDX67526	Canola	nucleus	23.66	26.13
Bra028522.1-P	Field mustard	nucleus	23.66	26.13
CDY69736	Canola	nucleus	22.71	26.09
CDY13370	Canola	nucleus	21.14	25.48
PGSC0003DMT400031954	Potato	nucleus	26.81	25.37
Solyc08g082710.2.1	Tomato	nucleus	25.55	24.32
AT5G42030.2	Thale cress	cytosol	22.08	21.74
Os01t0622700-01	Rice	plasma membrane	20.5	21.24
Os05t0585400-01	Rice	cytosol, mitochondrion, nucleus	19.24	20.2
CDY00780	Canola	plastid	14.83	20.09
Os01t0760900-01	Rice	nucleus	14.2	17.72

Protein Annotations

EMBL:AK064408	EnsemblPlants:Os01t0236400-01	EnsemblPlantsGene:Os01g0236400	EntrezGene:4327786	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	InterPro:ABI	PANTHER:PTHR10460	PANTHER:PTHR10460:SF16
ProteinID:BAD81273.1	ProteinID:BAF04443.2	ProteinID:BAS71231.1	ProteinID:EEE54196.1	RefSeq:XP_015633536.1	SEG:seg
UniParc:UPI000049E702	UniProt:Q5NB83	MapMan:20.2.2.2.5	:	:	:

Description

Similar to protein ABIL1. (Os01t0236400-01)

Coordinates

chr1:+:7557338..7560496

Molecular Weight (calculated)

36123.4 Da

IEP (calculated)

10.464

GRAVY (calculated)

-0.871

Length

317 amino acids

Sequence
(BLAST)

001: MEAITMSPSS VSSHHLDVDA ASTSEDMSSL QEGLLFSDSL KDLRNLRSQL YSAAEYFEVF YRNNSQKSTV MTSLKDYTVE ALVSTVDHLG FVSYKVDNLV
101: KERSDEVNET EFRVSSVEQR VRICQQTIDQ EGRSQQSLLI RAPKYHRRYI LPGTDIVESA IHPVSEPPRY SRQHMSRKMH KSQSISTPVG RQSTMRSARS
201: PSPSARGTHH RSRSLSPSRK ARAKSPSPQI ISTQTKETRA GSPIPNSNPL ARSATVARRP PVHPKHFRQT SMQLHSDWSN HKEQEKSSSK GRGFLKSLLT
301: RRRWRNDESL YSYLDEY

Best Arabidopsis Sequence Match ( AT5G24310.3 )
(BLAST)

001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE AVRATIRETP PPPVRKPILQ SPSQRKPQRS ATFSFSSIAT
201: APKKEQDKRA VSPHRFPLLR SGSVAIRPSS ISRPTTPSKS RAVTPTPKRY PSEPRRSASV RVAFEKEAQK EPEHQQQPSK SKRLLKALLS RRKTKKDDTL
301: YTYLDEY

Arabidopsis Description

ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.