CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0236400-01	Rice	nucleus	76.95	77.92
TraesCS3D01G166800.1	Wheat	nucleus	76.32	77.29
HORVU3Hr1G032200.1	Barley	nucleus	76.01	76.97
TraesCS3A01G159500.1	Wheat	nucleus	75.39	76.34
TraesCS3B01G190200.1	Wheat	nucleus	74.45	75.39
GSMUA_Achr10P...	Banana	cytosol	26.79	57.33
GSMUA_Achr7P14650_001	Banana	nucleus	26.79	49.14
CDX79218	Canola	cytosol	12.77	42.27
OQU87007	Sorghum	cytosol	19.94	41.83
GSMUA_Achr8P19680_001	Banana	nucleus	28.35	28.62
Bra025451.1-P	Field mustard	nucleus	23.36	27.17
CDY27664	Canola	nucleus	23.36	27.17
VIT_02s0025g02020.t01	Wine grape	nucleus	26.17	27.01
CDX67526	Canola	nucleus	23.36	26.13
Bra028522.1-P	Field mustard	nucleus	23.36	26.13
CDY69736	Canola	nucleus	22.43	26.09
CDY13370	Canola	nucleus	21.18	25.86
PGSC0003DMT400031954	Potato	nucleus	26.17	25.07
Solyc08g082710.2.1	Tomato	nucleus	25.23	24.32
AT5G42030.2	Thale cress	cytosol	23.05	22.98
KXG22631	Sorghum	cytosol	20.56	22.22
EES03303	Sorghum	nucleus	19.94	21.69
CDY00780	Canola	plastid	14.02	19.23
KXG33423	Sorghum	nucleus	14.02	17.44

Protein Annotations

EnsemblPlants:EES02170	EnsemblPlantsGene:SORBI_3003G003700	EntrezGene:8077551	InterPro:ABI	PANTHER:PTHR10460	PANTHER:PTHR10460:SF16
ProteinID:EES02170	ProteinID:EES02170.1	RefSeq:XP_002457050.1	SEG:seg	unigene:Sbi.17363	UniParc:UPI0001A84D7E
UniProt:C5XJJ5	MapMan:20.2.2.2.5	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:374739..378399

Molecular Weight (calculated)

36580.8 Da

IEP (calculated)

10.072

GRAVY (calculated)

-0.879

Length

321 amino acids

Sequence
(BLAST)

001: MEAVAMSPSS VSSHTHTHDD PDSASVTDGM SLQEGLLFSD TLKDLRNLRS QLYSAAEYFE VFYRNNSHKS TVMTSLKDYT VEAVVSTVDH LGFVSYKVDN
101: LVSEKADEVN ETEFLVSSVE QRVRICQQTT DQEGRSQQAL LIKAPKYHRR YILPGLDLLE SSIHPVSEPP RYNRQYTSRK MHKSQSSIST PVCRQTTMRR
201: AREPSPTPND AYHRSRSLSP SRKARAKSPS PRIVNTNTTK ETRAGSPIPN SNPLARSATV ARRPSLSSKH LRQTSMQLHT DWDQHKEQQK SSSKGRGFLK
301: SLLTRRRWRN DESLYSYLDE Y

Best Arabidopsis Sequence Match ( AT3G49290.1 )
(BLAST)

001: MPASHEASNY DEVSMQQSML FSDGLQDLKN LRAQLYSAAE YFELSYTTDD KKQIVVETLK DYAVKALVNT VDHLGSVTYK VNDFIDEKVD EVSETELRVS
101: CIEQRLRMCQ EYMDHEGRSQ QSLVIDTPKF HKRYILPAGE IMTATNLEKL KYFGSSLEDA DDWNQFRNAV RATIRETPPP PVRKSTSQSS SPRQPPQRSA
201: TFSFTSTIPK KEQDKRSVSP HRFPLLRSGS VATRKSASIS RPTTPSKSRS ITPIRYPSEP RRSASVRVAF EKDNQKETEQ QQPSKSKRLL KALLSRRKTK
301: KDDTLYTFLD EY

Arabidopsis Description

ABIL2At3g49290 [Source:UniProtKB/TrEMBL;Acc:Q147L2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.