CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G228600.1	Wheat	cytosol	76.95	75.17
Os01t0622700-01	Rice	plasma membrane	77.63	74.84
TraesCS3B01G254600.1	Wheat	cytosol	77.29	74.75
TraesCS3A01G225000.2	Wheat	cytosol, plastid	75.93	73.44
GSMUA_Achr3P31930_001	Banana	nucleus	42.03	61.69
CDY57047	Canola	mitochondrion	25.08	61.67
Zm00001d044184_P001	Maize	plastid	86.1	60.77
KXG22631	Sorghum	cytosol	59.66	59.26
GSMUA_Achr6P31890_001	Banana	nucleus	36.61	54.27
GSMUA_Achr3P15790_001	Banana	nucleus	41.36	48.8
GSMUA_Achr7P24740_001	Banana	nucleus	34.58	48.11
KRH48004	Soybean	nucleus	48.47	45.98
KRH06553	Soybean	nucleus	48.14	45.66
Bra004555.1-P	Field mustard	nucleus	46.44	45.21
CDX79998	Canola	nucleus	46.44	45.21
Solyc01g095280.2.1	Tomato	nucleus	46.44	44.92
CDY42020	Canola	nucleus	46.1	44.88
VIT_15s0046g01640.t01	Wine grape	cytosol	45.08	44.04
CDY68381	Canola	cytosol	45.08	43.32
CDX83376	Canola	cytosol	45.08	43.32
CDY26141	Canola	cytosol	29.15	43.22
Bra000416.1-P	Field mustard	cytosol	44.41	43.09
HORVU2Hr1G001180.6	Barley	cytosol	11.86	41.67
AT2G46225.2	Thale cress	nucleus	45.76	41.03
KRH68849	Soybean	cytosol	41.02	40.88
PGSC0003DMT400000237	Potato	cytosol	45.42	40.85
GSMUA_Achr9P05390_001	Banana	cytosol, nucleus, plastid	36.61	40.6
KRG97096	Soybean	cytosol	40.34	39.53
OQU87007	Sorghum	cytosol	18.31	35.29
CDY32903	Canola	cytosol	16.61	29.52
CDY61083	Canola	cytosol	16.61	29.52
CDY39460	Canola	cytosol	16.27	28.92
CDX86786	Canola	mitochondrion, plastid	20.68	25.52
CDX99519	Canola	cytosol	16.61	25.39
EES02170	Sorghum	nucleus	21.69	19.94
KXG33423	Sorghum	nucleus	16.27	18.6

Protein Annotations

EnsemblPlants:EES03303	EnsemblPlantsGene:SORBI_3003G225300	EntrezGene:8084848	InterPro:ABI	ncoils:Coil	PANTHER:PTHR10460
PANTHER:PTHR10460:SF14	ProteinID:EES03303	ProteinID:EES03303.1	RefSeq:XP_002458183.1	unigene:Sbi.15712	UniParc:UPI0001A85071
UniProt:C5XR63	MapMan:20.2.2.2.5	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:56125835..56129576

Molecular Weight (calculated)

33162.2 Da

IEP (calculated)

9.970

GRAVY (calculated)

-0.733

Length

295 amino acids

Sequence
(BLAST)

001: MQHEPWRAGA EPAGMAPTTV DEASMERSKS FVKALQELKN LRPQLYSASE YCEKSYLHSE QKQMVLDNLK DYAVRALVNA VDHLGTVAYK LTDLYEQQAS
101: EISTLELKVS CLNQQVLTCQ TYTDKEGVRQ QQMTGAARRH HKHYIVPYAG NKRMQAFSDM QADADFDSTP RPYSSARTLQ WHLVSEKNSK TSRPDQSEIA
201: QGDTKTTKPS SSGFRLGKES SASPLSRNVQ SNITSLDIVN VGMKDQPTTR HLSSFSSLDN PRGRQIQKAP LRTKSMLAAF FVKHRSAKMK NVSVR

Best Arabidopsis Sequence Match ( AT2G46225.1 )
(BLAST)

001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS

Arabidopsis Description

ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.