Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012690_P002 | Maize | cytosol | 56.98 | 58.33 |
| Os01t0760900-01 | Rice | nucleus | 52.71 | 53.54 |
| TraesCS3D01G296800.2 | Wheat | nucleus | 51.16 | 50.57 |
| TraesCS3A01G305000.1 | Wheat | nucleus | 52.33 | 50.37 |
| GSMUA_Achr9P06340_001 | Banana | nucleus | 26.36 | 44.16 |
| TraesCS3B01G331500.3 | Wheat | nucleus | 47.29 | 41.64 |
| GSMUA_Achr6P26790_001 | Banana | cytosol | 27.13 | 40.46 |
| HORVU3Hr1G073240.2 | Barley | plastid | 46.9 | 33.33 |
| Solyc12g007160.1.1 | Tomato | nucleus | 26.74 | 27.38 |
| KRH48370 | Soybean | nucleus | 25.97 | 26.17 |
| PGSC0003DMT400000827 | Potato | nucleus | 25.58 | 26.09 |
| KRH39303 | Soybean | nucleus | 25.58 | 25.88 |
| VIT_11s0016g03710.t01 | Wine grape | nucleus | 27.91 | 25.17 |
| KRH41556 | Soybean | nucleus | 23.26 | 23.9 |
| OQU87007 | Sorghum | cytosol | 13.95 | 23.53 |
| KRH60267 | Soybean | cytosol | 22.48 | 23.2 |
| KXG22631 | Sorghum | cytosol | 21.71 | 18.86 |
| EES03303 | Sorghum | nucleus | 18.6 | 16.27 |
| EES02170 | Sorghum | nucleus | 17.44 | 14.02 |
Protein Annotations
| EnsemblPlants:KXG33423 | EnsemblPlantsGene:SORBI_3003G303600 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF11 | ProteinID:KXG33423 |
| ProteinID:KXG33423.1 | SEG:seg | UniParc:UPI00081AC048 | UniProt:A0A1B6Q682 | MapMan:20.2.2.2.5 | : |
Description
hypothetical protein
Coordinates
chr3:-:63399624..63402253
Molecular Weight (calculated)
28193.4 Da
IEP (calculated)
9.144
GRAVY (calculated)
-0.529
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAEAGEAGM QQPGAASTST AAAAPFDRSS SRLGAPGAES FDGALRELKD LRSQLHEAAD CCEKAFLSTD KKKLILEGTK GYICDAVVAV IDHLGTVSSK
101: LEHKLQEKTD VTQTERKINF LKQRLLTCEQ YAISLKLLTV RGDPDAIQYH RRYISQSATQ RSKLGNDVGS SKNDPQLPEI TGPIVSGATL TLKPYDVQPA
201: TGKEHTVVSA NFEDSPRTIR RSFSFRAEDV HIFLGDQKKK ANHGSTSNIL SFLKKTKR
101: LEHKLQEKTD VTQTERKINF LKQRLLTCEQ YAISLKLLTV RGDPDAIQYH RRYISQSATQ RSKLGNDVGS SKNDPQLPEI TGPIVSGATL TLKPYDVQPA
201: TGKEHTVVSA NFEDSPRTIR RSFSFRAEDV HIFLGDQKKK ANHGSTSNIL SFLKKTKR
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.