Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G296800.2 | Wheat | nucleus | 75.37 | 77.39 |
| TraesCS3B01G331500.3 | Wheat | nucleus | 71.64 | 65.53 |
| Os01t0760900-01 | Rice | nucleus | 50.37 | 53.15 |
| KXG33423 | Sorghum | nucleus | 50.37 | 52.33 |
| Zm00001d012690_P002 | Maize | cytosol | 42.91 | 45.63 |
| GSMUA_Achr9P06340_001 | Banana | nucleus | 24.63 | 42.86 |
| HORVU3Hr1G073240.2 | Barley | plastid | 57.09 | 42.15 |
| GSMUA_Achr6P26790_001 | Banana | cytosol | 26.49 | 41.04 |
| PGSC0003DMT400000827 | Potato | nucleus | 25.37 | 26.88 |
| Solyc12g007160.1.1 | Tomato | nucleus | 25.0 | 26.59 |
| KRH48370 | Soybean | nucleus | 25.0 | 26.17 |
| KRH60267 | Soybean | cytosol | 24.25 | 26.0 |
| KRH39303 | Soybean | nucleus | 24.63 | 25.88 |
| KRH41556 | Soybean | nucleus | 23.13 | 24.7 |
| VIT_11s0016g03710.t01 | Wine grape | nucleus | 25.0 | 23.43 |
| TraesCS3A01G225000.2 | Wheat | cytosol, plastid | 20.52 | 18.03 |
| TraesCS1A01G424300.1 | Wheat | nucleus | 19.4 | 17.16 |
| TraesCS3A01G159500.1 | Wheat | nucleus | 17.54 | 14.83 |
| TraesCS1A01G056100.1 | Wheat | nucleus | 14.18 | 11.91 |
| TraesCS7A01G334100.2 | Wheat | nucleus | 13.81 | 11.31 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G305000.1 | EnsemblPlantsGene:TraesCS3A01G305000 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF11 | SEG:seg |
| MapMan:20.2.2.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:541099746..541103568
Molecular Weight (calculated)
28570.4 Da
IEP (calculated)
8.341
GRAVY (calculated)
-0.609
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGSAGDGE AGRQEGTPPS GAPTGPAAPF GRSSSSSGLG AKGGAAPQSF DGALRELKDL QSQLHQAADC CEKAFLATEE KRLILDSTKS YICNAVVAVI
101: DHLGTVSSKL EHQLEDKTEI MQTEQKISFL KQRLLTCEQY AISLQLLAVR ADAGAVQYHR RYLSQSTERN NQENVAKSSR DDPEEPLKLN STVAPGATRT
201: LKPYDAESTI GREHAVAGAD GGNPASTARS FSFRAEDVHV AAGGHHKKKK GSHGSNIMSF LKRSKRHA
101: DHLGTVSSKL EHQLEDKTEI MQTEQKISFL KQRLLTCEQY AISLQLLAVR ADAGAVQYHR RYLSQSTERN NQENVAKSSR DDPEEPLKLN STVAPGATRT
201: LKPYDAESTI GREHAVAGAD GGNPASTARS FSFRAEDVHV AAGGHHKKKK GSHGSNIMSF LKRSKRHA
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGAMSSSL SLLVNNTSSQ ISNSLSNMLG
201: LTHLDAPASK SLSWHLGSET KSTLKGTSTV APSSKDSKAF SKTSGVFHLL GDDENIANKK PLAGSQVSGV PAASTAHKDL EVPKLLTAHR SLDNNPRREI
301: IQAPVRTKSV LSAFFVKQKT PKLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGAMSSSL SLLVNNTSSQ ISNSLSNMLG
201: LTHLDAPASK SLSWHLGSET KSTLKGTSTV APSSKDSKAF SKTSGVFHLL GDDENIANKK PLAGSQVSGV PAASTAHKDL EVPKLLTAHR SLDNNPRREI
301: IQAPVRTKSV LSAFFVKQKT PKLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.