Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000827 | Potato | nucleus | 38.11 | 43.08 |
| GSMUA_Achr9P06340_001 | Banana | nucleus | 22.73 | 42.21 |
| KRH48370 | Soybean | nucleus | 37.76 | 42.19 |
| KRH39303 | Soybean | nucleus | 37.41 | 41.96 |
| Solyc12g007160.1.1 | Tomato | nucleus | 36.71 | 41.67 |
| KRH60267 | Soybean | cytosol | 35.31 | 40.4 |
| KRH41556 | Soybean | nucleus | 34.27 | 39.04 |
| GSMUA_Achr6P26790_001 | Banana | cytosol | 23.43 | 38.73 |
| TraesCS3D01G296800.2 | Wheat | nucleus | 27.27 | 29.89 |
| KXG33423 | Sorghum | nucleus | 25.17 | 27.91 |
| Os01t0760900-01 | Rice | nucleus | 23.78 | 26.77 |
| Zm00001d012690_P002 | Maize | cytosol | 23.43 | 26.59 |
| TraesCS3A01G305000.1 | Wheat | nucleus | 23.43 | 25.0 |
| TraesCS3B01G331500.3 | Wheat | nucleus | 24.48 | 23.89 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 20.63 | 19.54 |
| HORVU3Hr1G073240.2 | Barley | plastid | 22.38 | 17.63 |
| VIT_02s0025g02020.t01 | Wine grape | nucleus | 17.48 | 16.08 |
| VIT_16s0098g01720.t01 | Wine grape | extracellular | 19.23 | 14.91 |
Protein Annotations
| ArrayExpress:VIT_11s0016g03710 | EMBL:FN595756 | EnsemblPlants:VIT_11s0016g03710.t01 | EnsemblPlantsGene:VIT_11s0016g03710 | EntrezGene:100266194 | EntrezGene:LOC100266194 |
| InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF11 | ProteinID:CBI28051 | ProteinID:CBI28051.3 | RefSeq:XP_002284308 |
| RefSeq:XP_002284308.1 | SEG:seg | unigene:Vvi.15618 | UniParc:UPI0001BE3139 | UniProt:D7TBL6 | wikigene:100266194 |
| wikigene:LOC100266194 | MapMan:20.2.2.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3044618..3049139
Molecular Weight (calculated)
32926.6 Da
IEP (calculated)
10.129
GRAVY (calculated)
-0.661
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MARALCFYSY TFVFKKKKKE MQESESPAHA ISEAESEDTV DQFHESLQEL RQLRSQLHKA ADYCETTFLN TKQKKVLVEN TKEYICRAVV TVVDHLGCVS
101: NNLDYLLFKN NSSSEIEVRI GCLKQRLLTC QQYVHKLALT QVRWNPNLPR YSHRYISPPL PDVERSNGGL RESYQTAAAK TTKKQEFKAE GVPLFLYTSA
201: HKPSLARKSP PETDAKKTDH TNSTSVLPVR EGLPILSKQQ NPPFHFQLNH KLRRKKLKLV RNNDILSLIR RGKRAAELLK GLHLDH
101: NNLDYLLFKN NSSSEIEVRI GCLKQRLLTC QQYVHKLALT QVRWNPNLPR YSHRYISPPL PDVERSNGGL RESYQTAAAK TTKKQEFKAE GVPLFLYTSA
201: HKPSLARKSP PETDAKKTDH TNSTSVLPVR EGLPILSKQQ NPPFHFQLNH KLRRKKLKLV RNNDILSLIR RGKRAAELLK GLHLDH
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGSETKST LKGTSTVAPS SKDSKAFSKT
201: SGVFHLLGDD ENIANKKPLA GSQVSGVPAA STAHKDLEVP KLLTAHRSLD NNPRREIIQA PVRTKSVLSA FFVKQKTPKL KAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGSETKST LKGTSTVAPS SKDSKAFSKT
201: SGVFHLLGDD ENIANKKPLA GSQVSGVPAA STAHKDLEVP KLLTAHRSLD NNPRREIIQA PVRTKSVLSA FFVKQKTPKL KAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.