Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G296800.2 | Wheat | nucleus | 42.7 | 59.39 |
| TraesCS3A01G305000.1 | Wheat | nucleus | 42.15 | 57.09 |
| TraesCS3B01G331500.3 | Wheat | nucleus | 39.12 | 48.46 |
| KXG33423 | Sorghum | nucleus | 33.33 | 46.9 |
| Os01t0760900-01 | Rice | nucleus | 32.78 | 46.85 |
| GSMUA_Achr9P06340_001 | Banana | nucleus | 17.91 | 42.21 |
| Zm00001d012690_P002 | Maize | cytosol | 27.0 | 38.89 |
| GSMUA_Achr6P26790_001 | Banana | cytosol | 18.46 | 38.73 |
| Solyc12g007160.1.1 | Tomato | nucleus | 18.18 | 26.19 |
| PGSC0003DMT400000827 | Potato | nucleus | 17.63 | 25.3 |
| KRH48370 | Soybean | nucleus | 16.8 | 23.83 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 5.51 | 23.81 |
| VIT_11s0016g03710.t01 | Wine grape | nucleus | 17.63 | 22.38 |
| KRH39303 | Soybean | nucleus | 15.7 | 22.35 |
| KRH60267 | Soybean | cytosol | 15.15 | 22.0 |
| KRH41556 | Soybean | nucleus | 14.05 | 20.32 |
| HORVU1Hr1G092730.1 | Barley | plastid | 15.15 | 15.85 |
| HORVU3Hr1G032200.1 | Barley | nucleus | 11.85 | 13.56 |
| HORVU1Hr1G011420.2 | Barley | nucleus | 10.74 | 12.04 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G073240.2 | EnsemblPlantsGene:HORVU3Hr1G073240 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF11 | SEG:seg |
| UniParc:UPI000B47EA78 | UniProt:A0A287LMR4 | MapMan:20.2.2.2.5 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:552892039..552894526
Molecular Weight (calculated)
39030.0 Da
IEP (calculated)
8.327
GRAVY (calculated)
-0.401
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: TTRTRAYALP VTSAAHASAP SKRSAPLTRS ATPTEGSRDR LPRLVPLLPT FSCPPANSSF ARVCTCHFPA PIVVILSALL SLPCPSFLAW EMDAGSAGEA
101: GRQEGTPTGP AAPFGRSSSS SSGLGAKGGA TPQSFDGALR ELKDLQAQLH QAADCCEKAF LATEKKQLIL DSTKSYICDA VVAVIDHLGT VSSKLEHQLE
201: DKTEITQTEQ KISFLKQRLL TCEQYAISLQ LLAVRADTGA CQYHRRYLSQ STERNNQENV AKSSRGDPEP FKLNSTVAQG ATRTMKPYEV ESSIGREHAV
301: AGADVGNPAS ITRSFSFRAE GCSRCCRGAS QEEKERQPWQ QHHVISQEKQ TTCITVKSAT GCS
101: GRQEGTPTGP AAPFGRSSSS SSGLGAKGGA TPQSFDGALR ELKDLQAQLH QAADCCEKAF LATEKKQLIL DSTKSYICDA VVAVIDHLGT VSSKLEHQLE
201: DKTEITQTEQ KISFLKQRLL TCEQYAISLQ LLAVRADTGA CQYHRRYLSQ STERNNQENV AKSSRGDPEP FKLNSTVAQG ATRTMKPYEV ESSIGREHAV
301: AGADVGNPAS ITRSFSFRAE GCSRCCRGAS QEEKERQPWQ QHHVISQEKQ TTCITVKSAT GCS
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.