Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G433300.1 | Wheat | nucleus | 91.09 | 92.93 |
| TraesCS1B01G456600.1 | Wheat | nucleus | 83.17 | 82.62 |
| HORVU1Hr1G092730.1 | Barley | plastid | 81.52 | 71.18 |
| KXG22631 | Sorghum | cytosol | 65.02 | 66.33 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 63.7 | 64.77 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 61.72 | 61.92 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 37.95 | 57.21 |
| CDY57047 | Canola | mitochondrion | 22.44 | 56.67 |
| TraesCS3A01G225000.2 | Wheat | cytosol, plastid | 55.12 | 54.75 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 34.65 | 52.76 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 38.94 | 47.2 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 30.69 | 43.87 |
| KRH06553 | Soybean | nucleus | 43.56 | 42.44 |
| KRH48004 | Soybean | nucleus | 42.9 | 41.8 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 36.63 | 41.73 |
| CDX79998 | Canola | nucleus | 41.58 | 41.58 |
| Solyc01g095280.2.1 | Tomato | nucleus | 41.58 | 41.31 |
| Bra004555.1-P | Field mustard | nucleus | 41.25 | 41.25 |
| CDY42020 | Canola | nucleus | 40.92 | 40.92 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 40.59 | 40.73 |
| CDY26141 | Canola | cytosol | 26.4 | 40.2 |
| CDY68381 | Canola | cytosol | 40.59 | 40.07 |
| CDX83376 | Canola | cytosol | 39.93 | 39.41 |
| Bra000416.1-P | Field mustard | cytosol | 39.27 | 39.14 |
| KRG97096 | Soybean | cytosol | 38.28 | 38.54 |
| KRH68849 | Soybean | cytosol | 37.62 | 38.51 |
| PGSC0003DMT400000237 | Potato | cytosol | 40.92 | 37.8 |
| AT2G46225.2 | Thale cress | nucleus | 40.92 | 37.69 |
| CDY32903 | Canola | cytosol | 15.51 | 28.31 |
| CDY61083 | Canola | cytosol | 15.51 | 28.31 |
| CDY39460 | Canola | cytosol | 14.85 | 27.11 |
| CDX99519 | Canola | cytosol | 16.17 | 25.39 |
| TraesCS1A01G056100.1 | Wheat | nucleus | 23.76 | 22.57 |
| CDX86786 | Canola | mitochondrion, plastid | 17.16 | 21.76 |
| TraesCS3A01G159500.1 | Wheat | nucleus | 22.11 | 21.14 |
| TraesCS7A01G334100.2 | Wheat | nucleus | 22.11 | 20.49 |
| TraesCS3A01G305000.1 | Wheat | nucleus | 17.16 | 19.4 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G424300.1 | EnsemblPlantsGene:TraesCS1A01G424300 | InterPro:ABI | ncoils:Coil | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 |
| SEG:seg | MapMan:20.2.2.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:579300387..579302858
Molecular Weight (calculated)
33963.3 Da
IEP (calculated)
10.184
GRAVY (calculated)
-0.695
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MERMQQQQEE QQAARRRRSP GGWEGAGAAT VDEASMERSK SFVNALQELK NLRPQLYSAS EYCERSYLNT HQKQMVLDNL KDYAVRAVVN AVDHLGTVAY
101: KLTDLFEQQA SEISTFELKL ARLNQQIFTC QIYVDKEGSR QQQMMGASMK HHKHYILPST GYKRTQAVAY LGTDTNQESQ PRPYPSAKTL SWHLASDNSP
201: SANRAHKPTF ILDDTIPSKL ASDGPHLLGK ELPASPVRRP LQLNRNIKSD VAQKVGAKDL SAFSSFDRPT GREIQKAPAS TKSVLASLFI KHKSAKMKSI
301: SAR
101: KLTDLFEQQA SEISTFELKL ARLNQQIFTC QIYVDKEGSR QQQMMGASMK HHKHYILPST GYKRTQAVAY LGTDTNQESQ PRPYPSAKTL SWHLASDNSP
201: SANRAHKPTF ILDDTIPSKL ASDGPHLLGK ELPASPVRRP LQLNRNIKSD VAQKVGAKDL SAFSSFDRPT GREIQKAPAS TKSVLASLFI KHKSAKMKSI
301: SAR
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.