Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G433300.1 | Wheat | nucleus | 84.59 | 86.87 |
| TraesCS1A01G424300.1 | Wheat | nucleus | 82.62 | 83.17 |
| HORVU1Hr1G092730.1 | Barley | plastid | 87.87 | 77.23 |
| KXG22631 | Sorghum | cytosol | 66.23 | 68.01 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 64.26 | 65.77 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 64.92 | 65.56 |
| CDY57047 | Canola | mitochondrion | 22.95 | 58.33 |
| TraesCS3B01G254600.1 | Wheat | cytosol | 58.03 | 58.03 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 37.38 | 56.72 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 35.08 | 53.77 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 40.33 | 49.2 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 31.15 | 44.81 |
| KRH48004 | Soybean | nucleus | 44.26 | 43.41 |
| KRH06553 | Soybean | nucleus | 43.93 | 43.09 |
| Solyc01g095280.2.1 | Tomato | nucleus | 41.97 | 41.97 |
| Bra004555.1-P | Field mustard | nucleus | 41.64 | 41.91 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 36.39 | 41.73 |
| CDY42020 | Canola | nucleus | 41.31 | 41.58 |
| CDX79998 | Canola | nucleus | 41.31 | 41.58 |
| KRH68849 | Soybean | cytosol | 40.33 | 41.55 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 40.98 | 41.39 |
| CDY26141 | Canola | cytosol | 26.89 | 41.21 |
| CDY68381 | Canola | cytosol | 40.98 | 40.72 |
| KRG97096 | Soybean | cytosol | 39.34 | 39.87 |
| CDX83376 | Canola | cytosol | 39.67 | 39.41 |
| Bra000416.1-P | Field mustard | cytosol | 38.69 | 38.82 |
| PGSC0003DMT400000237 | Potato | cytosol | 41.31 | 38.41 |
| AT2G46225.2 | Thale cress | nucleus | 40.98 | 37.99 |
| CDY32903 | Canola | cytosol | 15.41 | 28.31 |
| CDY61083 | Canola | cytosol | 15.41 | 28.31 |
| CDY39460 | Canola | cytosol | 15.08 | 27.71 |
| CDX99519 | Canola | cytosol | 15.41 | 24.35 |
| TraesCS1B01G073300.4 | Wheat | nucleus | 23.28 | 22.19 |
| CDX86786 | Canola | mitochondrion, plastid | 17.05 | 21.76 |
| TraesCS3B01G190200.1 | Wheat | nucleus | 21.97 | 21.14 |
| TraesCS7B01G245700.1 | Wheat | nucleus | 22.3 | 20.8 |
| TraesCS3B01G331500.3 | Wheat | nucleus | 16.39 | 17.06 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G456600.1 | EnsemblPlantsGene:TraesCS1B01G456600 | InterPro:ABI | ncoils:Coil | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 |
| SEG:seg | MapMan:20.2.2.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:671196273..671198784
Molecular Weight (calculated)
34157.4 Da
IEP (calculated)
10.311
GRAVY (calculated)
-0.798
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQQEQEQQ AARRRRRSPG GWEGATVDEA SMERSKSFVK ALQELKNLRP QLYSASEYCE KSYLNTHQKQ MVLDNLKDYA VRAVVNAVDH LGTVAYKLTD
101: LFEQQASEIS TFELKLARLN QQVFTCQIYV DKEGSRQQQM MGASMKHHKH YILPSTGYKR TQAVAHLGTD TNQESQPRPY PSAKTLSWHL ASDNSPSANG
201: AHKPTFILDD TISSKVASDG SNLLGKEQPA SPMRRPLQLN RNTKSDVTQK AGTKDQPGVK HMSTFSSFDR ATGREIQKAP ASTKSVLASL FIKHKSAKMK
301: SISAR
101: LFEQQASEIS TFELKLARLN QQVFTCQIYV DKEGSRQQQM MGASMKHHKH YILPSTGYKR TQAVAHLGTD TNQESQPRPY PSAKTLSWHL ASDNSPSANG
201: AHKPTFILDD TISSKVASDG SNLLGKEQPA SPMRRPLQLN RNTKSDVTQK AGTKDQPGVK HMSTFSSFDR ATGREIQKAP ASTKSVLASL FIKHKSAKMK
301: SISAR
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.