Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G424300.1 | Wheat | nucleus | 92.93 | 91.09 |
| TraesCS1B01G456600.1 | Wheat | nucleus | 86.87 | 84.59 |
| HORVU1Hr1G092730.1 | Barley | plastid | 82.49 | 70.61 |
| KXG22631 | Sorghum | cytosol | 65.99 | 65.99 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 64.31 | 64.09 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 63.97 | 62.91 |
| CDY57047 | Canola | mitochondrion | 23.57 | 58.33 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 39.06 | 57.71 |
| TraesCS3D01G228600.1 | Wheat | cytosol | 56.9 | 55.96 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 35.69 | 53.27 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 41.08 | 48.8 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 31.99 | 44.81 |
| Solyc01g095280.2.1 | Tomato | nucleus | 43.43 | 42.3 |
| KRH06553 | Soybean | nucleus | 44.11 | 42.12 |
| CDX79998 | Canola | nucleus | 42.76 | 41.91 |
| KRH48004 | Soybean | nucleus | 43.77 | 41.8 |
| Bra004555.1-P | Field mustard | nucleus | 42.42 | 41.58 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 42.09 | 41.39 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 37.04 | 41.35 |
| CDY42020 | Canola | nucleus | 42.09 | 41.25 |
| CDY68381 | Canola | cytosol | 42.42 | 41.04 |
| CDY26141 | Canola | cytosol | 27.27 | 40.7 |
| Bra000416.1-P | Field mustard | cytosol | 41.08 | 40.13 |
| CDX83376 | Canola | cytosol | 41.08 | 39.74 |
| KRG97096 | Soybean | cytosol | 40.07 | 39.53 |
| KRH68849 | Soybean | cytosol | 39.39 | 39.53 |
| PGSC0003DMT400000237 | Potato | cytosol | 42.76 | 38.72 |
| AT2G46225.2 | Thale cress | nucleus | 42.09 | 37.99 |
| CDY61083 | Canola | cytosol | 15.82 | 28.31 |
| CDY32903 | Canola | cytosol | 15.82 | 28.31 |
| CDY39460 | Canola | cytosol | 15.15 | 27.11 |
| CDX99519 | Canola | cytosol | 16.5 | 25.39 |
| TraesCS1D01G056800.2 | Wheat | nucleus | 24.58 | 22.74 |
| CDX86786 | Canola | mitochondrion, plastid | 17.51 | 21.76 |
| TraesCS3D01G166800.1 | Wheat | nucleus | 22.9 | 21.45 |
| TraesCS7D01G341700.2 | Wheat | nucleus | 23.23 | 21.1 |
| TraesCS3D01G296800.2 | Wheat | nucleus | 17.17 | 19.54 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G433300.1 | EnsemblPlantsGene:TraesCS1D01G433300 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 | SEG:seg |
| MapMan:20.2.2.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:482833564..482836044
Molecular Weight (calculated)
33225.4 Da
IEP (calculated)
10.126
GRAVY (calculated)
-0.700
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQQEEEQP ARRRRSPGGW EGATVDEASM ERSKSFVKAL QELKNLRPQL YSASEYCEKS YLNTHQKQMV LDNLKDYAVR AVVNAVDHLG TVAYKLTDLF
101: EQQASEISTF ELKVARLNQQ IFTCQIYVDK EGSRQQQMMG ASMKHHKHYI LPSTGYKRTQ AVAHLGTDTN QESQPRPYPS AKTLSWHLAS DNSPSANGAH
201: KLTFILDDTI PSKLASDGPH LLGKELPASP VRRPLQLNRN TKSDVAQKVG AKDLSAFSSF DRPTGREIQK APASTKSVLA SLFIKHKSAK MKSISAR
101: EQQASEISTF ELKVARLNQQ IFTCQIYVDK EGSRQQQMMG ASMKHHKHYI LPSTGYKRTQ AVAHLGTDTN QESQPRPYPS AKTLSWHLAS DNSPSANGAH
201: KLTFILDDTI PSKLASDGPH LLGKELPASP VRRPLQLNRN TKSDVAQKVG AKDLSAFSSF DRPTGREIQK APASTKSVLA SLFIKHKSAK MKSISAR
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.