Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79998 | Canola | nucleus | 94.06 | 94.06 |
| CDX83376 | Canola | cytosol | 80.2 | 79.15 |
| CDY68381 | Canola | cytosol | 79.54 | 78.5 |
| AT2G46225.2 | Thale cress | nucleus | 80.2 | 73.86 |
| CDY57047 | Canola | mitochondrion | 28.71 | 72.5 |
| CDX86786 | Canola | mitochondrion, plastid | 52.81 | 66.95 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 58.09 | 58.28 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 38.61 | 58.21 |
| KRH06553 | Soybean | nucleus | 59.41 | 57.88 |
| KRH48004 | Soybean | nucleus | 58.42 | 56.91 |
| Solyc01g095280.2.1 | Tomato | nucleus | 55.78 | 55.41 |
| KRH68849 | Soybean | cytosol | 52.81 | 54.05 |
| KRG97096 | Soybean | cytosol | 52.48 | 52.82 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 33.99 | 51.76 |
| PGSC0003DMT400000237 | Potato | cytosol | 55.78 | 51.52 |
| CDY26141 | Canola | cytosol | 32.01 | 48.74 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 39.27 | 47.6 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 32.67 | 46.7 |
| EES03303 | Sorghum | nucleus | 44.88 | 46.1 |
| TraesCS3D01G228600.1 | Wheat | cytosol | 44.88 | 45.03 |
| TraesCS3B01G254600.1 | Wheat | cytosol | 44.88 | 44.59 |
| TraesCS3A01G225000.2 | Wheat | cytosol, plastid | 44.88 | 44.59 |
| Os01t0622700-01 | Rice | plasma membrane | 44.55 | 44.12 |
| TraesCS1D01G433300.1 | Wheat | nucleus | 41.25 | 42.09 |
| KXG22631 | Sorghum | cytosol | 40.92 | 41.75 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 40.92 | 41.61 |
| TraesCS1B01G456600.1 | Wheat | nucleus | 41.58 | 41.31 |
| TraesCS1A01G424300.1 | Wheat | nucleus | 40.92 | 40.92 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 40.59 | 40.73 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 35.64 | 40.6 |
| CDX79218 | Canola | cytosol | 12.21 | 38.14 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 10.56 | 38.1 |
| HORVU1Hr1G092730.1 | Barley | plastid | 41.58 | 36.31 |
| CDY39460 | Canola | cytosol | 19.8 | 36.14 |
| CDY32903 | Canola | cytosol | 19.14 | 34.94 |
| CDY61083 | Canola | cytosol | 19.14 | 34.94 |
| CDX99519 | Canola | cytosol | 21.45 | 33.68 |
| Zm00001d044184_P001 | Maize | plastid | 42.57 | 30.86 |
| CDX88092 | Canola | nucleus | 26.4 | 24.92 |
| CDY05919 | Canola | nucleus | 25.74 | 24.76 |
| CDY08121 | Canola | nucleus | 25.74 | 24.61 |
| CDX80429 | Canola | nucleus | 26.07 | 24.31 |
| CDX67526 | Canola | nucleus | 21.45 | 22.65 |
| CDY69736 | Canola | nucleus | 20.46 | 22.46 |
| CDY27664 | Canola | nucleus | 20.46 | 22.46 |
| CDY13370 | Canola | nucleus | 19.47 | 22.43 |
| CDY00780 | Canola | plastid | 14.52 | 18.8 |
Protein Annotations
| EnsemblPlants:CDY42020 | EnsemblPlantsGene:GSBRNA2T00074033001 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 | ProteinID:CDY42020 |
| ProteinID:CDY42020.1 | UniParc:UPI0004EDD32B | UniProt:A0A078HU52 | MapMan:20.2.2.2.5 | : | : |
Description
BnaC04g00980DBnaC04g00980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU52]
Coordinates
chrLK032512:+:72635..74855
Molecular Weight (calculated)
33564.1 Da
IEP (calculated)
9.912
GRAVY (calculated)
-0.494
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: METEASVTEN PAMTFDEVSM ERSKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DQQSSDVSIM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRSESR QNHSQAISRL QPSDAPASKS LSWHLGGSET KSTLKGTTTV
201: APSSKDSKAF AKTSGVFHLL GDEENIKPLV GGSQASGVPG TSTITRQTYG VAQKDMEAPK LMTGHKSLDN PRREIIQAPV RTKSVLSAFF VKQKTPKLKA
301: GYV
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRSESR QNHSQAISRL QPSDAPASKS LSWHLGGSET KSTLKGTTTV
201: APSSKDSKAF AKTSGVFHLL GDEENIKPLV GGSQASGVPG TSTITRQTYG VAQKDMEAPK LMTGHKSLDN PRREIIQAPV RTKSVLSAFF VKQKTPKLKA
301: GYV
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.