Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57047 | Canola | mitochondrion | 38.14 | 30.83 |
| GSMUA_Achr10P... | Banana | cytosol | 45.36 | 29.33 |
| CDY00780 | Canola | plastid | 61.86 | 25.64 |
| GSMUA_Achr7P14650_001 | Banana | nucleus | 41.24 | 22.86 |
| CDX88092 | Canola | nucleus | 75.26 | 22.74 |
| CDX80429 | Canola | nucleus | 74.23 | 22.15 |
| CDY26141 | Canola | cytosol | 38.14 | 18.59 |
| CDY05919 | Canola | nucleus | 59.79 | 18.41 |
| CDY08121 | Canola | nucleus | 59.79 | 18.3 |
| CDY27664 | Canola | nucleus | 49.48 | 17.39 |
| CDY69736 | Canola | nucleus | 48.45 | 17.03 |
| CDX67526 | Canola | nucleus | 47.42 | 16.03 |
| TraesCS3A01G159500.1 | Wheat | nucleus | 47.42 | 14.51 |
| TraesCS3B01G190200.1 | Wheat | nucleus | 47.42 | 14.51 |
| HORVU3Hr1G032200.1 | Barley | nucleus | 47.42 | 14.51 |
| TraesCS3D01G166800.1 | Wheat | nucleus | 47.42 | 14.51 |
| CDY13370 | Canola | nucleus | 39.18 | 14.45 |
| GSMUA_Achr8P19680_001 | Banana | nucleus | 46.39 | 14.15 |
| Os01t0236400-01 | Rice | nucleus | 43.3 | 13.25 |
| EES02170 | Sorghum | nucleus | 42.27 | 12.77 |
| CDX79998 | Canola | nucleus | 38.14 | 12.21 |
| CDY42020 | Canola | nucleus | 38.14 | 12.21 |
| CDY68381 | Canola | cytosol | 38.14 | 12.05 |
| CDX83376 | Canola | cytosol | 38.14 | 12.05 |
| CDY61083 | Canola | cytosol | 19.59 | 11.45 |
| CDY39460 | Canola | cytosol | 19.59 | 11.45 |
| CDX99519 | Canola | cytosol | 20.62 | 10.36 |
| CDY32903 | Canola | cytosol | 17.53 | 10.24 |
| CDX86786 | Canola | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX79218 | EnsemblPlantsGene:GSBRNA2T00131815001 | InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF10 | ProteinID:CDX79218 |
| ProteinID:CDX79218.1 | UniParc:UPI0004EEAB1F | MapMan:20.2.2.2.5 | : | : | : |
Description
BnaC06g20850D
Coordinates
chrLK031817:+:397324..397811
Molecular Weight (calculated)
11348.4 Da
IEP (calculated)
5.529
GRAVY (calculated)
-0.462
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MHMPREGSNY NEISMQQSLL FSYSLKYDIF VLHDLKNLRT QLYSAVKYFE LSYTNDGDTQ SVVETQKHYA IKTLVNTVDH LGSVTYKLNE FVDEKVD
001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE AVRATIRETP PPPVRKPILQ SPSQRKPQRS ATFSFSSIAT
201: APKKEQDKRA VSPHRFPLLR SGSVAIRPSS ISRPTTPSKS RAVTPTPKRY PSEPRRSASV RVAFEKEAQK EPEHQQQPSK SKRLLKALLS RRKTKKDDTL
301: YTYLDEY
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE AVRATIRETP PPPVRKPILQ SPSQRKPQRS ATFSFSSIAT
201: APKKEQDKRA VSPHRFPLLR SGSVAIRPSS ISRPTTPSKS RAVTPTPKRY PSEPRRSASV RVAFEKEAQK EPEHQQQPSK SKRLLKALLS RRKTKKDDTL
301: YTYLDEY
Arabidopsis Description
ABIL3Protein ABIL3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.