Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61083 | Canola | cytosol | 72.86 | 87.35 |
| CDY32903 | Canola | cytosol | 72.36 | 86.75 |
| CDY39460 | Canola | cytosol | 67.34 | 80.72 |
| CDY57047 | Canola | mitochondrion | 45.23 | 75.0 |
| CDX99519 | Canola | cytosol | 56.28 | 58.03 |
| GSMUA_Achr3P31930_001 | Banana | nucleus | 40.7 | 40.3 |
| HORVU2Hr1G001180.6 | Barley | cytosol | 16.58 | 39.29 |
| CDX79218 | Canola | cytosol | 18.59 | 38.14 |
| GSMUA_Achr7P24740_001 | Banana | nucleus | 39.7 | 37.26 |
| GSMUA_Achr6P31890_001 | Banana | nucleus | 35.18 | 35.18 |
| CDX79998 | Canola | nucleus | 49.75 | 32.67 |
| CDY42020 | Canola | nucleus | 48.74 | 32.01 |
| GSMUA_Achr3P15790_001 | Banana | nucleus | 40.2 | 32.0 |
| CDY68381 | Canola | cytosol | 48.74 | 31.6 |
| CDX83376 | Canola | cytosol | 48.24 | 31.27 |
| AT2G46225.2 | Thale cress | nucleus | 49.25 | 29.79 |
| GSMUA_Achr9P05390_001 | Banana | cytosol, nucleus, plastid | 39.2 | 29.32 |
| EES03303 | Sorghum | nucleus | 43.22 | 29.15 |
| VIT_15s0046g01640.t01 | Wine grape | cytosol | 44.22 | 29.14 |
| Os05t0585400-01 | Rice | cytosol, mitochondrion, nucleus | 42.21 | 27.81 |
| Solyc01g095280.2.1 | Tomato | nucleus | 42.21 | 27.54 |
| TraesCS3D01G228600.1 | Wheat | cytosol | 41.71 | 27.48 |
| Os01t0622700-01 | Rice | plasma membrane | 42.21 | 27.45 |
| TraesCS1D01G433300.1 | Wheat | nucleus | 40.7 | 27.27 |
| KXG22631 | Sorghum | cytosol | 40.2 | 26.94 |
| TraesCS1B01G456600.1 | Wheat | nucleus | 41.21 | 26.89 |
| TraesCS3B01G254600.1 | Wheat | cytosol | 41.21 | 26.89 |
| TraesCS3A01G225000.2 | Wheat | cytosol, plastid | 41.21 | 26.89 |
| KRH48004 | Soybean | nucleus | 41.71 | 26.69 |
| TraesCS1A01G424300.1 | Wheat | nucleus | 40.2 | 26.4 |
| KRH06553 | Soybean | nucleus | 41.21 | 26.37 |
| Zm00001d009707_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 39.2 | 26.17 |
| PGSC0003DMT400000237 | Potato | cytosol | 42.21 | 25.61 |
| KRH68849 | Soybean | cytosol | 35.68 | 23.99 |
| HORVU1Hr1G092730.1 | Barley | plastid | 40.7 | 23.34 |
| KRG97096 | Soybean | cytosol | 35.18 | 23.26 |
| Zm00001d044184_P001 | Maize | plastid | 39.7 | 18.9 |
| CDY13370 | Canola | nucleus | 23.62 | 17.87 |
| CDY27664 | Canola | nucleus | 24.62 | 17.75 |
| CDY69736 | Canola | nucleus | 24.12 | 17.39 |
| CDY00780 | Canola | plastid | 20.1 | 17.09 |
| CDY05919 | Canola | nucleus | 26.13 | 16.51 |
| CDY08121 | Canola | nucleus | 26.13 | 16.4 |
| CDX88092 | Canola | nucleus | 26.13 | 16.2 |
| CDX67526 | Canola | nucleus | 23.12 | 16.03 |
| CDX80429 | Canola | nucleus | 25.63 | 15.69 |
| CDX86786 | Canola | mitochondrion, plastid | 10.55 | 8.79 |
Protein Annotations
| EnsemblPlants:CDY26141 | EnsemblPlantsGene:GSBRNA2T00034793001 | GO:A0A078GLD7 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:ABI | PANTHER:PTHR10460 | PANTHER:PTHR10460:SF14 | PFAM:PF02238 | ProteinID:CDY26141 | ProteinID:CDY26141.1 |
| TMHMM:TMhelix | UniParc:UPI0004EE396B | UniProt:A0A078GLD7 | MapMan:20.2.2.2.5 | : | : |
Description
BnaC06g10550DBnaC06g10550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLD7]
Coordinates
chrLK032185:+:541340..542534
Molecular Weight (calculated)
22970.0 Da
IEP (calculated)
6.010
GRAVY (calculated)
0.013
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMDDDLRRG SMERSKSFVK ALHELKNLRP QLYSAVDYCE KSYLHSEQKQ MVLDNLKDYT VKALVNVVDH LGTVASKLTN LFDQQSSDIS TMELRASCVS
101: QQLLTCGTLS VLSDDLNQDR IIAMRQKWRL CEIDVEDYFF VLLTRLFQSI QRHIYLKGPM DKVTSVAIPL ALAASSLYMI NCVFMLFHVF LESVMFFTE
101: QQLLTCGTLS VLSDDLNQDR IIAMRQKWRL CEIDVEDYFF VLLTRLFQSI QRHIYLKGPM DKVTSVAIPL ALAASSLYMI NCVFMLFHVF LESVMFFTE
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS
Arabidopsis Description
ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.