CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009707_P001	Maize	cytosol, mitochondrion, nucleus, plastid	87.21	86.91
TraesCS1B01G456600.1	Wheat	nucleus	68.01	66.23
TraesCS1D01G433300.1	Wheat	nucleus	65.99	65.99
Os05t0585400-01	Rice	cytosol, mitochondrion, nucleus	66.67	65.56
TraesCS1A01G424300.1	Wheat	nucleus	66.33	65.02
CDY57047	Canola	mitochondrion	24.24	60.0
GSMUA_Achr3P31930_001	Banana	nucleus	40.4	59.7
EES03303	Sorghum	nucleus	59.26	59.66
HORVU1Hr1G092730.1	Barley	plastid	67.0	57.35
GSMUA_Achr6P31890_001	Banana	nucleus	36.7	54.77
GSMUA_Achr3P15790_001	Banana	nucleus	39.39	46.8
GSMUA_Achr7P24740_001	Banana	nucleus	32.32	45.28
KRH48004	Soybean	nucleus	45.79	43.73
VIT_15s0046g01640.t01	Wine grape	cytosol	44.11	43.38
KRH06553	Soybean	nucleus	44.78	42.77
Solyc01g095280.2.1	Tomato	nucleus	43.43	42.3
Bra004555.1-P	Field mustard	nucleus	42.09	41.25
CDX79998	Canola	nucleus	42.09	41.25
GSMUA_Achr9P05390_001	Banana	cytosol, nucleus, plastid	36.7	40.98
CDY42020	Canola	nucleus	41.75	40.92
CDY26141	Canola	cytosol	26.94	40.2
KRH68849	Soybean	cytosol	39.73	39.86
CDY68381	Canola	cytosol	41.08	39.74
CDX83376	Canola	cytosol	40.74	39.41
Bra000416.1-P	Field mustard	cytosol	40.07	39.14
PGSC0003DMT400000237	Potato	cytosol	42.76	38.72
KRG97096	Soybean	cytosol	39.06	38.54
AT2G46225.2	Thale cress	nucleus	40.74	36.78
OQU87007	Sorghum	cytosol	17.85	34.64
CDY61083	Canola	cytosol	15.15	27.11
CDY32903	Canola	cytosol	14.81	26.51
CDY39460	Canola	cytosol	14.48	25.9
CDX99519	Canola	cytosol	15.15	23.32
KXG33423	Sorghum	nucleus	18.86	21.71
CDX86786	Canola	mitochondrion, plastid	17.17	21.34
EES02170	Sorghum	nucleus	22.22	20.56

Protein Annotations

EnsemblPlants:KXG22631	EnsemblPlantsGene:SORBI_3009G248900	InterPro:ABI	ncoils:Coil	PANTHER:PTHR10460	PANTHER:PTHR10460:SF14
ProteinID:KXG22631	ProteinID:KXG22631.1	SEG:seg	UniParc:UPI00081AB482	UniProt:A0A1B6PAI2	MapMan:20.2.2.2.5

Description

hypothetical protein

Coordinates

chr9:+:58425095..58428172

Molecular Weight (calculated)

32936.2 Da

IEP (calculated)

10.249

GRAVY (calculated)

-0.671

Length

297 amino acids

Sequence
(BLAST)

001: MQPPQHCLPA AGAWGGVAGA GAGPTTVDEA SMERSKSFIK ALQELKNLRP QLYSASEYCE KSYLNSEQKQ MVLDNLKDYA VRAVVNAVDH LGTVAYKLTD
101: LFEQQASEVS TYELKVARLN QQIFTCQVYT DKEGLRQQQM MTANIKHHKH YILPPGYKRS PAHGHLQADT DQESKPRPYP SAKTLSWHLS SENSTKANTH
201: KPTFALLETA PSTPASGKER SASPMRRPLQ FNRSTSSDAM QKVGTKNQSG VKEFSTFHSF DNPKGRAIQK APVGTKSMLA ALFIKHKSSK MKKIAVR

Best Arabidopsis Sequence Match ( AT2G46225.1 )
(BLAST)

001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM
101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSDAPASKS LSWHLGSETK STLKGTSTVA
201: PSSKDSKAFS KTSGVFHLLG DDENIANKKP LAGSQVSGVP AASTAHKDLE VPKLLTAHRS LDNNPRREII QAPVRTKSVL SAFFVKQKTP KLKAGYVS

Arabidopsis Description

ABIL1ABI-1-like 1 [Source:UniProtKB/TrEMBL;Acc:B3H5V3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.