Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G23910.1 | Thale cress | cytosol | 75.18 | 74.11 |
| KRG97337 | Soybean | extracellular | 26.99 | 46.67 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 44.58 | 43.53 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 39.76 | 42.75 |
| Solyc09g092180.2.1 | Tomato | cytosol | 40.96 | 40.96 |
| KRH31580 | Soybean | cytosol, nucleus | 37.59 | 40.1 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 67.23 | 33.7 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 23.86 | 30.84 |
| Os04t0379800-01 | Rice | cytosol | 29.88 | 30.39 |
| TraesCS2B01G297900.1 | Wheat | cytosol | 30.36 | 30.14 |
| TraesCS2A01G280600.1 | Wheat | cytosol | 30.36 | 30.07 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 29.4 | 29.12 |
| EES12008 | Sorghum | cytosol | 26.27 | 27.25 |
| Zm00001d004020_P003 | Maize | cytosol | 27.47 | 26.15 |
Protein Annotations
| EnsemblPlants:CDX77476 | EnsemblPlantsGene:GSBRNA2T00128343001 | ncoils:Coil | PANTHER:PTHR36037 | ProteinID:CDX77476 | ProteinID:CDX77476.1 |
| SEG:seg | UniParc:UPI0004EED910 | MapMan:35.2 | : | : | : |
Description
BnaA07g06140D
Coordinates
chrLK031811:+:998758..1001743
Molecular Weight (calculated)
47534.0 Da
IEP (calculated)
4.614
GRAVY (calculated)
-0.512
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHPHDESF HLQEIHSRVK ELEHRHRNCR DESGESIPCG FEALAQDYAL QLETKVKEIV EDYCHVEESE AYLEYLRKEL HSAEAESAKV SQEIERLSKA
101: HAEDSTRLES DLEGLLFSLD FLSSQDVDKS KENLPSSSSM EVCDVDYDEK FKMFELENQI EEKKVILKSL EDLDSVRERF DATEQVEDAF TGLRVLKFDE
201: NFITLQLRTC IPKLDGLLGQ HDLVHTTEPS ELIHELLIHL KDKTTEITKV EMLPNDVYIG DIIDAADSLR QIRLHSALLD TRSSLQWLVA KVKERIISAT
301: LRKCMAKSSK TIRHTFEYYD KDETIVAHIA GGIDAFLKVS DGWPLLNSPL KLASLKNSEN HSNEISLSLI CKVEELANSL DLQTRQNLSS FMDAVEKILM
401: QQSREELNSS EPSQK
101: HAEDSTRLES DLEGLLFSLD FLSSQDVDKS KENLPSSSSM EVCDVDYDEK FKMFELENQI EEKKVILKSL EDLDSVRERF DATEQVEDAF TGLRVLKFDE
201: NFITLQLRTC IPKLDGLLGQ HDLVHTTEPS ELIHELLIHL KDKTTEITKV EMLPNDVYIG DIIDAADSLR QIRLHSALLD TRSSLQWLVA KVKERIISAT
301: LRKCMAKSSK TIRHTFEYYD KDETIVAHIA GGIDAFLKVS DGWPLLNSPL KLASLKNSEN HSNEISLSLI CKVEELANSL DLQTRQNLSS FMDAVEKILM
401: QQSREELNSS EPSQK
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.