Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G297900.1 | Wheat | cytosol | 60.05 | 58.61 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 60.05 | 58.47 |
| TraesCS2A01G280600.1 | Wheat | cytosol | 59.8 | 58.23 |
| EES12008 | Sorghum | cytosol | 49.51 | 50.5 |
| Zm00001d004020_P003 | Maize | cytosol | 49.51 | 46.33 |
| KRG97337 | Soybean | extracellular | 22.55 | 38.33 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 27.45 | 34.89 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 36.03 | 34.59 |
| AT3G23910.1 | Thale cress | cytosol | 31.86 | 30.88 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 29.17 | 30.83 |
| CDX77476 | Canola | nucleus | 30.39 | 29.88 |
| KRH31580 | Soybean | cytosol, nucleus | 28.43 | 29.82 |
| Solyc09g092180.2.1 | Tomato | cytosol | 29.66 | 29.16 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 30.88 | 15.22 |
Protein Annotations
| EnsemblPlants:Os04t0379800-01 | EnsemblPlantsGene:Os04g0379800 | EntrezGene:4335626 | ncoils:Coil | PANTHER:PTHR36037 | ProteinID:BAF14507.1 |
| ProteinID:BAS88878.1 | ProteinID:EEE60867.1 | RefSeq:XP_015634430.1 | SEG:seg | UniParc:UPI0000DD9038 | UniProt:Q0JDT0 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved hypothetical protein. (Os04t0379800-01)
Coordinates
chr4:+:18554460..18559331
Molecular Weight (calculated)
45625.0 Da
IEP (calculated)
4.438
GRAVY (calculated)
-0.243
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETLAEDAA DAPLDAAAIR SRLERLALSR RGEEEVASAA AAAADAVRRL PSVEDVEPLQ GLEFDAWASS AAPMESDFDA FMEWLSKEVS LAEEENRKLS
101: VEISSVAETT LKDSIQLDAD IAELESSLKK IDSQGLKHLE ASHIAELSVS TDSCRDQIKF DKDYKYEVLE LNQQLEKYEN DLKLLENQKS AEAMWELESM
201: LSEANVLDFK DNCLRVFLKE AVLTPECLMY GKESDCSVNS FVSDHELLIE VGENMEPKKV QIFPDDTCVD ILLDKLKASR ETISTTSLGW IIRQFQHHII
301: INTLRRSLVK DANNSRHSFE YIDKDGTILA HLAGGIDAFI KISADWPLSS CGLKLISIHS SRAQSADISL ALLSKTKELA NGLELQTRRH LVKFVDAIED
401: ILFREMRS
101: VEISSVAETT LKDSIQLDAD IAELESSLKK IDSQGLKHLE ASHIAELSVS TDSCRDQIKF DKDYKYEVLE LNQQLEKYEN DLKLLENQKS AEAMWELESM
201: LSEANVLDFK DNCLRVFLKE AVLTPECLMY GKESDCSVNS FVSDHELLIE VGENMEPKKV QIFPDDTCVD ILLDKLKASR ETISTTSLGW IIRQFQHHII
301: INTLRRSLVK DANNSRHSFE YIDKDGTILA HLAGGIDAFI KISADWPLSS CGLKLISIHS SRAQSADISL ALLSKTKELA NGLELQTRRH LVKFVDAIED
401: ILFREMRS
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.