Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G280600.1 | Wheat | cytosol | 93.54 | 93.32 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 93.3 | 93.08 |
| Os04t0379800-01 | Rice | cytosol | 58.61 | 60.05 |
| EES12008 | Sorghum | cytosol | 52.87 | 55.25 |
| Zm00001d004020_P003 | Maize | cytosol | 53.35 | 51.15 |
| KRG97337 | Soybean | extracellular | 21.77 | 37.92 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 26.32 | 34.27 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 34.45 | 33.88 |
| AT3G23910.1 | Thale cress | cytosol | 32.54 | 32.3 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 29.19 | 31.61 |
| KRH31580 | Soybean | cytosol, nucleus | 28.71 | 30.85 |
| CDX77476 | Canola | nucleus | 30.14 | 30.36 |
| Solyc09g092180.2.1 | Tomato | cytosol | 29.67 | 29.88 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 31.1 | 15.7 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G297900.1 | EnsemblPlantsGene:TraesCS2B01G297900 | PANTHER:PTHR36037 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:417073352..417079349
Molecular Weight (calculated)
46744.5 Da
IEP (calculated)
4.228
GRAVY (calculated)
-0.179
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVMAETLA LAPVEDPEAP LDAAAIRSRF EQLSTLWGGD EEEPVDAAAE DELRSGCEAD MQAEDAWDSS AAELESRCLD SYIEWLRKEV SLAEEENCKL
101: SAEISVIGET VFKDTIPLDA EIESLESSLN TLDSEGLKHS KASPISTDSG FNQIDIEKDC KYQELKLDHQ MGRSEMDLKL LQIQSISMQR DEEMWQLQSL
201: VSGPKVLEFK DNCLRVLLKA PILTSECVIL GQKLDCVVDS FVSDHELLIE VDEGSMELNK VQIFPADVCV DILIEKLKSS REVISAPSLG WLIRQCQQHI
301: VINILRRSLV NDANNSRHSF EYFDKDETIV AHLVGAIDAF FKISADWPLS SYGLKLISIR NSGTQPTNIT LDLLCKTKEL ANGLELETRR HLVRFVDAVE
401: EILVREMQSE LHSSRVSA
101: SAEISVIGET VFKDTIPLDA EIESLESSLN TLDSEGLKHS KASPISTDSG FNQIDIEKDC KYQELKLDHQ MGRSEMDLKL LQIQSISMQR DEEMWQLQSL
201: VSGPKVLEFK DNCLRVLLKA PILTSECVIL GQKLDCVVDS FVSDHELLIE VDEGSMELNK VQIFPADVCV DILIEKLKSS REVISAPSLG WLIRQCQQHI
301: VINILRRSLV NDANNSRHSF EYFDKDETIV AHLVGAIDAF FKISADWPLS SYGLKLISIR NSGTQPTNIT LDLLCKTKEL ANGLELETRR HLVRFVDAVE
401: EILVREMQSE LHSSRVSA
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.