Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g092180.2.1 | Tomato | cytosol | 87.56 | 81.45 |
| KRG97337 | Soybean | extracellular | 29.79 | 47.92 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 50.0 | 45.41 |
| CDX77476 | Canola | nucleus | 42.75 | 39.76 |
| AT3G23910.1 | Thale cress | cytosol | 41.45 | 38.0 |
| KRH31580 | Soybean | cytosol, nucleus | 36.79 | 36.5 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 29.79 | 35.83 |
| TraesCS2A01G280600.1 | Wheat | cytosol | 31.87 | 29.36 |
| TraesCS2D01G279400.1 | Wheat | cytosol | 31.87 | 29.36 |
| TraesCS2B01G297900.1 | Wheat | cytosol | 31.61 | 29.19 |
| Os04t0379800-01 | Rice | cytosol | 30.83 | 29.17 |
| EES12008 | Sorghum | cytosol | 26.68 | 25.75 |
| Zm00001d004020_P003 | Maize | cytosol | 26.94 | 23.85 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 40.67 | 18.96 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400067932 | EnsemblPlantsGene:PGSC0003DMG400026422 | ncoils:Coil | PANTHER:PTHR36037 | PGSC:PGSC0003DMG400026422 | SEG:seg |
| UniParc:UPI0002951C2E | UniProt:M1CI52 | MapMan:35.2 | : | : | : |
Description
HAPp48,5 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026422]
Coordinates
chr9:+:59321891..59328873
Molecular Weight (calculated)
43599.9 Da
IEP (calculated)
4.373
GRAVY (calculated)
-0.186
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTIFFFQTG VCSLGMILQR KVEQILCDAS EISFSSDQDL DEFWKYLKNE LSTEEANNAK IADEIEGLSR EYVEGYSKLV NEIEGLSCPL ELIESLGLEQ
101: GRVLTNFPCS TPGEDKGNVS SAPVEQNFKV FELGNQLEKS KLNLKSLEEL ESTFNRFEAI EKIEDAFSGL KIVEFEGNRI RLSLRTFIPN LENLLHNQTI
201: DVAEPPEQNH ELLIELMDGT MELKHVEIFP NDVSISYITD TAKSLRQVYF PVGVLENRSS LEWFVKGVQD RIVLSTLRRF LVKSANSSRH SFDYVDREET
301: IVAHMVGGID AFIKLPQGWP LTSSGLTLMS LKSSSQYSQQ ISLTLLCKVA EVANLLDTNE RQTISGFTDR VEEILMQQMT AVTTST
101: GRVLTNFPCS TPGEDKGNVS SAPVEQNFKV FELGNQLEKS KLNLKSLEEL ESTFNRFEAI EKIEDAFSGL KIVEFEGNRI RLSLRTFIPN LENLLHNQTI
201: DVAEPPEQNH ELLIELMDGT MELKHVEIFP NDVSISYITD TAKSLRQVYF PVGVLENRSS LEWFVKGVQD RIVLSTLRRF LVKSANSSRH SFDYVDREET
301: IVAHMVGGID AFIKLPQGWP LTSSGLTLMS LKSSSQYSQQ ISLTLLCKVA EVANLLDTNE RQTISGFTDR VEEILMQQMT AVTTST
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.