Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G279400.1 | Wheat | cytosol | 95.7 | 95.7 |
| TraesCS2B01G297900.1 | Wheat | cytosol | 93.32 | 93.54 |
| Os04t0379800-01 | Rice | cytosol | 58.23 | 59.8 |
| EES12008 | Sorghum | cytosol | 52.98 | 55.5 |
| Zm00001d004020_P003 | Maize | cytosol | 53.22 | 51.15 |
| KRG97337 | Soybean | extracellular | 21.72 | 37.92 |
| VIT_05s0029g00640.t01 | Wine grape | cytosol | 35.08 | 34.59 |
| GSMUA_Achr6P20770_001 | Banana | cytosol, endoplasmic reticulum | 26.01 | 33.96 |
| AT3G23910.1 | Thale cress | cytosol | 32.46 | 32.3 |
| PGSC0003DMT400067932 | Potato | extracellular, vacuole | 29.36 | 31.87 |
| KRH31580 | Soybean | cytosol, nucleus | 28.88 | 31.11 |
| Solyc09g092180.2.1 | Tomato | cytosol | 30.31 | 30.6 |
| CDX77476 | Canola | nucleus | 30.07 | 30.36 |
| AT3G24255.7 | Thale cress | endoplasmic reticulum | 30.07 | 15.22 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G280600.1 | EnsemblPlantsGene:TraesCS2A01G280600 | PANTHER:PTHR36037 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2A:+:468526339..468532832
Molecular Weight (calculated)
46595.4 Da
IEP (calculated)
4.261
GRAVY (calculated)
-0.168
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMAETLA LAPVEDPEAP LDAAAIRSRF KQLSTLWGGD EEEPVDAAAA EDGLRSGCEA DMQAEDAWDS SAAELESRCL DLYIEWLRKE VSLTEEENCK
101: LSAEISVIGE TVFKDMIPLD AEIESLESSL NTLGSEGLKH SEASPISTDS GFNQIDIEKD CKYEELKLDH QIGKSEMDLK LLQIQSISMQ RDEEMWQLQS
201: LVSGPKVLEC KDNCLRVLLK APILTSECVI LGQKLDCVVD SSVSDHELLI EVDEGSMELN KVQIFPADVC VDILIEKLKS SREVISAPSL GWLIRQCQQQ
301: IVINTLRRSL VNDANNSRHS FEYFDKDETI VAHLVGAIDA FFKISADWPL SSYGLKLISI RNSGTQPTNI TLHLLCKTKE LANGLELETR RHLVRFVDAV
401: EEILVREMQS ELHSSRVSA
101: LSAEISVIGE TVFKDMIPLD AEIESLESSL NTLGSEGLKH SEASPISTDS GFNQIDIEKD CKYEELKLDH QIGKSEMDLK LLQIQSISMQ RDEEMWQLQS
201: LVSGPKVLEC KDNCLRVLLK APILTSECVI LGQKLDCVVD SSVSDHELLI EVDEGSMELN KVQIFPADVC VDILIEKLKS SREVISAPSL GWLIRQCQQQ
301: IVINTLRRSL VNDANNSRHS FEYFDKDETI VAHLVGAIDA FFKISADWPL SSYGLKLISI RNSGTQPTNI TLHLLCKTKE LANGLELETR RHLVRFVDAV
401: EEILVREMQS ELHSSRVSA
001: MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
101: ERLSQSHAQD SSRLQRDLEG LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD SLRKRFDAAE QVEDALTGLK
201: VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD
301: KIISTTLRKY IVMSSKTIRY TFEYYDKDET IVAHIAGGID AFLKVSDGWP LLNTPLKLAS LKNSDNQSKG ISLSLICKVE ELANSLDLET RQNLSGFMDA
401: IEKILVEQTR EELQSNKSSQ K
Arabidopsis Description
HAPp48,5 protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:P92952]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.